Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm46218-202ENSMUST00000215520 1956 ntBASIC9.61□□□□□ -0.87
Lsm3P62311 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Lsm3P62311 Pde4d-209ENSMUST00000122041 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Rimbp2-207ENSMUST00000200470 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Dnajc14-201ENSMUST00000026410 4229 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 Zfp275-201ENSMUST00000033731 6376 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 Gm15163-201ENSMUST00000120749 1302 ntBASIC9.6□□□□□ -0.87
Lsm3P62311 Srprb-201ENSMUST00000035157 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 Nadsyn1-201ENSMUST00000033415 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 Cpsf3-211ENSMUST00000222968 1858 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 Trib2-201ENSMUST00000020922 4198 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 Ctnnd1-202ENSMUST00000066177 5044 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 Scml2-202ENSMUST00000074802 3440 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Lsm3P62311 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Lsm3P62311 Serpinc1-201ENSMUST00000064725 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC9.6□□□□□ -0.87
Lsm3P62311 Gm23931-201ENSMUST00000103842 109 ntBASIC9.6□□□□□ -0.87
Lsm3P62311 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC9.6□□□□□ -0.87
Lsm3P62311 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Lsm3P62311 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC9.6□□□□□ -0.87
Lsm3P62311 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC9.6□□□□□ -0.87
Lsm3P62311 Gm5616-201ENSMUST00000165252 384 ntBASIC9.6□□□□□ -0.87
Lsm3P62311 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Lsm3P62311 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 Gm8741-201ENSMUST00000174736 384 ntBASIC9.6□□□□□ -0.87
Lsm3P62311 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 Gm29396-201ENSMUST00000185659 716 ntBASIC9.6□□□□□ -0.87
Lsm3P62311 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC9.6□□□□□ -0.87
Lsm3P62311 Gm42833-201ENSMUST00000196019 2124 ntBASIC9.6□□□□□ -0.87
Lsm3P62311 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC9.6□□□□□ -0.87
Lsm3P62311 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC9.6□□□□□ -0.87
Lsm3P62311 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Lsm3P62311 Plcd4-201ENSMUST00000027362 2977 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Lsm3P62311 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Lsm3P62311 Mthfr-202ENSMUST00000097788 2652 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 Gm44629-201ENSMUST00000206951 1840 ntBASIC9.6□□□□□ -0.87
Lsm3P62311 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 Gm42979-201ENSMUST00000196287 2228 ntBASIC9.6□□□□□ -0.87
Lsm3P62311 Tanc1-208ENSMUST00000139863 7246 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 5730419F03Rik-201ENSMUST00000190504 2092 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 Serpinb9c-201ENSMUST00000021837 1902 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 Oc90-201ENSMUST00000060522 1909 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 AC124426.1-201ENSMUST00000220871 2707 ntTSL 2 BASIC9.6□□□□□ -0.87
Lsm3P62311 Olfm3-202ENSMUST00000081752 4647 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 Ftsj3-201ENSMUST00000021048 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 Ccnc-202ENSMUST00000102997 3365 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm3P62311 Mis18bp1-201ENSMUST00000052201 4017 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm3P62311 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm3P62311 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm3P62311 Sgk2-202ENSMUST00000117123 3034 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm3P62311 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Lsm3P62311 Spry4-201ENSMUST00000025295 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm3P62311 Vps8-202ENSMUST00000096192 4942 ntTSL 5 BASIC9.59□□□□□ -0.87
Lsm3P62311 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC9.59□□□□□ -0.87
Lsm3P62311 Ap3m1-206ENSMUST00000154460 6732 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm3P62311 Pik3r4-210ENSMUST00000191268 4756 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm3P62311 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Lsm3P62311 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm3P62311 Gm13226-201ENSMUST00000117838 404 ntBASIC9.59□□□□□ -0.87
Lsm3P62311 Gm13296-201ENSMUST00000117854 997 ntBASIC9.59□□□□□ -0.87
Lsm3P62311 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC9.59□□□□□ -0.87
Lsm3P62311 Recql5os1-201ENSMUST00000134391 396 ntTSL 5 BASIC9.59□□□□□ -0.87
Lsm3P62311 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm3P62311 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm3P62311 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Lsm3P62311 Mipep-ps-201ENSMUST00000177439 291 ntBASIC9.59□□□□□ -0.87
Lsm3P62311 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Lsm3P62311 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Lsm3P62311 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Lsm3P62311 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Lsm3P62311 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm3P62311 Gm27627-201ENSMUST00000183644 150 ntBASIC9.59□□□□□ -0.87
Lsm3P62311 Gm3332-201ENSMUST00000189337 928 ntBASIC9.59□□□□□ -0.87
Lsm3P62311 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC9.59□□□□□ -0.87
Lsm3P62311 Gm44155-201ENSMUST00000203923 412 ntBASIC9.59□□□□□ -0.87
Lsm3P62311 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm3P62311 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC9.59□□□□□ -0.87
Lsm3P62311 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm3P62311 Gm45880-201ENSMUST00000213041 853 ntBASIC9.59□□□□□ -0.87
Lsm3P62311 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC9.59□□□□□ -0.87
Lsm3P62311 AC140451.2-201ENSMUST00000228030 664 ntBASIC9.59□□□□□ -0.87
Lsm3P62311 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm3P62311 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm3P62311 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC9.59□□□□□ -0.87
Lsm3P62311 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm3P62311 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms