Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gm12337-201ENSMUST00000119634 400 ntBASIC8.63□□□□□ -1.03
Lmo4P61969 Gm15554-201ENSMUST00000120406 913 ntBASIC8.63□□□□□ -1.03
Lmo4P61969 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC8.63□□□□□ -1.03
Lmo4P61969 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC8.63□□□□□ -1.03
Lmo4P61969 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC8.63□□□□□ -1.03
Lmo4P61969 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Lmo4P61969 Gm5976-201ENSMUST00000180794 996 ntBASIC8.63□□□□□ -1.03
Lmo4P61969 Gm4960-201ENSMUST00000182928 1001 ntBASIC8.63□□□□□ -1.03
Lmo4P61969 Gm28916-201ENSMUST00000186988 699 ntBASIC8.63□□□□□ -1.03
Lmo4P61969 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC8.63□□□□□ -1.03
Lmo4P61969 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC8.63□□□□□ -1.03
Lmo4P61969 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Lmo4P61969 Gm42780-201ENSMUST00000197083 734 ntBASIC8.63□□□□□ -1.03
Lmo4P61969 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
Lmo4P61969 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Lmo4P61969 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC8.63□□□□□ -1.03
Lmo4P61969 AC139155.1-201ENSMUST00000226043 444 ntBASIC8.63□□□□□ -1.03
Lmo4P61969 Gm8615-201ENSMUST00000025307 771 ntBASIC8.63□□□□□ -1.03
Lmo4P61969 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Lmo4P61969 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Lmo4P61969 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Lmo4P61969 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Lmo4P61969 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Lmo4P61969 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Lmo4P61969 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Lmo4P61969 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Lmo4P61969 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Lmo4P61969 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Lmo4P61969 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Lmo4P61969 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Lmo4P61969 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Lmo4P61969 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Lmo4P61969 Gm44913-201ENSMUST00000208060 2990 ntBASIC8.63□□□□□ -1.03
Lmo4P61969 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Lmo4P61969 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Lmo4P61969 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Lmo4P61969 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC8.63□□□□□ -1.03
Lmo4P61969 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Lmo4P61969 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Lmo4P61969 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Lmo4P61969 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Lmo4P61969 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Lmo4P61969 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Lmo4P61969 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC8.62□□□□□ -1.03
Lmo4P61969 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Lmo4P61969 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Lmo4P61969 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Lmo4P61969 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Lmo4P61969 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC8.62□□□□□ -1.03
Lmo4P61969 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Lmo4P61969 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Lmo4P61969 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Lmo4P61969 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC8.62□□□□□ -1.03
Lmo4P61969 Gm38187-201ENSMUST00000195609 4709 ntBASIC8.62□□□□□ -1.03
Lmo4P61969 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Lmo4P61969 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
Lmo4P61969 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Lmo4P61969 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Lmo4P61969 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Lmo4P61969 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC8.62□□□□□ -1.03
Lmo4P61969 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Lmo4P61969 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Lmo4P61969 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Lmo4P61969 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Lmo4P61969 Gm12489-201ENSMUST00000119364 148 ntBASIC8.62□□□□□ -1.03
Lmo4P61969 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Lmo4P61969 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC8.62□□□□□ -1.03
Lmo4P61969 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Lmo4P61969 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC8.62□□□□□ -1.03
Lmo4P61969 Gm24294-201ENSMUST00000158295 277 ntBASIC8.62□□□□□ -1.03
Lmo4P61969 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Lmo4P61969 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC8.62□□□□□ -1.03
Lmo4P61969 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC8.62□□□□□ -1.03
Lmo4P61969 Gm5335-201ENSMUST00000182995 1000 ntBASIC8.62□□□□□ -1.03
Lmo4P61969 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC8.62□□□□□ -1.03
Lmo4P61969 Gm38321-201ENSMUST00000195053 235 ntBASIC8.62□□□□□ -1.03
Lmo4P61969 Gm19566-201ENSMUST00000199576 610 ntBASIC8.62□□□□□ -1.03
Lmo4P61969 Gm30055-201ENSMUST00000203175 803 ntBASIC8.62□□□□□ -1.03
Lmo4P61969 Gm44388-201ENSMUST00000204350 258 ntBASIC8.62□□□□□ -1.03
Lmo4P61969 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Lmo4P61969 Gm5738-201ENSMUST00000206016 779 ntBASIC8.62□□□□□ -1.03
Lmo4P61969 Gm45363-201ENSMUST00000210196 1294 ntBASIC8.62□□□□□ -1.03
Lmo4P61969 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC8.62□□□□□ -1.03
Lmo4P61969 Gm2716-201ENSMUST00000212350 643 ntBASIC8.62□□□□□ -1.03
Lmo4P61969 Gm7904-201ENSMUST00000217049 465 ntBASIC8.62□□□□□ -1.03
Lmo4P61969 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC8.62□□□□□ -1.03
Lmo4P61969 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Lmo4P61969 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Lmo4P61969 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Lmo4P61969 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Lmo4P61969 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Lmo4P61969 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Lmo4P61969 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Lmo4P61969 AC154220.1-201ENSMUST00000225033 1705 ntBASIC8.62□□□□□ -1.03
Lmo4P61969 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
Lmo4P61969 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Lmo4P61969 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Lmo4P61969 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Lmo4P61969 Klf10-203ENSMUST00000227920 2144 ntBASIC8.62□□□□□ -1.03
Lmo4P61969 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC8.62□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms