Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Gm9135-201ENSMUST00000182963 990 ntBASIC10.55□□□□□ -0.72
Cd9P40240 Mrgprx3-ps-201ENSMUST00000187741 918 ntBASIC10.55□□□□□ -0.72
Cd9P40240 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cd9P40240 Gm37365-201ENSMUST00000193109 409 ntBASIC10.55□□□□□ -0.72
Cd9P40240 Gm31274-201ENSMUST00000197356 229 ntBASIC10.55□□□□□ -0.72
Cd9P40240 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC10.55□□□□□ -0.72
Cd9P40240 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC10.55□□□□□ -0.72
Cd9P40240 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd9P40240 Gm8181-201ENSMUST00000062242 669 ntBASIC10.55□□□□□ -0.72
Cd9P40240 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd9P40240 Gm7536-201ENSMUST00000077389 444 ntBASIC10.55□□□□□ -0.72
Cd9P40240 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Cd9P40240 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cd9P40240 AC125351.1-201ENSMUST00000221438 2223 ntBASIC10.55□□□□□ -0.72
Cd9P40240 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd9P40240 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd9P40240 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cd9P40240 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd9P40240 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd9P40240 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cd9P40240 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cd9P40240 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd9P40240 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Cd9P40240 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cd9P40240 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd9P40240 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd9P40240 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd9P40240 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
Cd9P40240 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cd9P40240 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cd9P40240 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Cd9P40240 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.54□□□□□ -0.72
Cd9P40240 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cd9P40240 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cd9P40240 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cd9P40240 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cd9P40240 Gm43625-201ENSMUST00000199177 1539 ntBASIC10.54□□□□□ -0.72
Cd9P40240 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Cd9P40240 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Cd9P40240 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cd9P40240 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cd9P40240 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Cd9P40240 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cd9P40240 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC10.54□□□□□ -0.72
Cd9P40240 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Cd9P40240 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Cd9P40240 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC10.54□□□□□ -0.72
Cd9P40240 Gm8216-201ENSMUST00000117232 601 ntBASIC10.54□□□□□ -0.72
Cd9P40240 Gm16288-201ENSMUST00000137940 367 ntBASIC10.54□□□□□ -0.72
Cd9P40240 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC10.54□□□□□ -0.72
Cd9P40240 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC10.54□□□□□ -0.72
Cd9P40240 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
Cd9P40240 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cd9P40240 Gm29543-201ENSMUST00000188138 967 ntBASIC10.54□□□□□ -0.72
Cd9P40240 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC10.54□□□□□ -0.72
Cd9P40240 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cd9P40240 Gm44216-201ENSMUST00000203942 157 ntBASIC10.54□□□□□ -0.72
Cd9P40240 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC10.54□□□□□ -0.72
Cd9P40240 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC10.54□□□□□ -0.72
Cd9P40240 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cd9P40240 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Cd9P40240 Gm5805-201ENSMUST00000072779 456 ntBASIC10.54□□□□□ -0.72
Cd9P40240 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cd9P40240 Atf7-201ENSMUST00000096143 390 ntBASIC10.54□□□□□ -0.72
Cd9P40240 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Cd9P40240 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cd9P40240 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cd9P40240 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cd9P40240 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cd9P40240 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cd9P40240 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cd9P40240 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cd9P40240 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cd9P40240 Gm21039-201ENSMUST00000223359 2012 ntBASIC10.53□□□□□ -0.72
Cd9P40240 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cd9P40240 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Cd9P40240 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Cd9P40240 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Cd9P40240 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cd9P40240 Creb3l4-202ENSMUST00000107369 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cd9P40240 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC10.53□□□□□ -0.72
Cd9P40240 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cd9P40240 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cd9P40240 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC10.53□□□□□ -0.72
Cd9P40240 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC10.53□□□□□ -0.72
Cd9P40240 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cd9P40240 Gm25830-201ENSMUST00000158923 132 ntBASIC10.53□□□□□ -0.72
Cd9P40240 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC10.53□□□□□ -0.72
Cd9P40240 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC10.53□□□□□ -0.72
Cd9P40240 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC10.53□□□□□ -0.72
Cd9P40240 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC10.53□□□□□ -0.72
Cd9P40240 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC10.53□□□□□ -0.72
Cd9P40240 AC153512.3-201ENSMUST00000220426 662 ntTSL 3 BASIC10.53□□□□□ -0.72
Cd9P40240 Gm26670-202ENSMUST00000226862 340 ntBASIC10.53□□□□□ -0.72
Cd9P40240 AC161172.1-201ENSMUST00000227801 486 ntBASIC10.53□□□□□ -0.72
Cd9P40240 AC154806.7-201ENSMUST00000227998 202 ntBASIC10.53□□□□□ -0.72
Cd9P40240 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cd9P40240 Nln-205ENSMUST00000224945 2486 ntBASIC10.53□□□□□ -0.72
Cd9P40240 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.53□□□□□ -0.72
Cd9P40240 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms