Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc9P09633 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC13.78□□□□□ -0.2
Hoxc9P09633 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc9P09633 Gm25561-201ENSMUST00000104607 125 ntBASIC13.78□□□□□ -0.2
Hoxc9P09633 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc9P09633 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc9P09633 Gm12345-201ENSMUST00000119288 898 ntBASIC13.78□□□□□ -0.2
Hoxc9P09633 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC13.78□□□□□ -0.2
Hoxc9P09633 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC13.78□□□□□ -0.2
Hoxc9P09633 Maats1os-201ENSMUST00000133496 326 ntTSL 3 BASIC13.78□□□□□ -0.2
Hoxc9P09633 Gm8464-202ENSMUST00000146697 1142 ntBASIC13.78□□□□□ -0.2
Hoxc9P09633 Gm4750-201ENSMUST00000151942 1142 ntBASIC13.78□□□□□ -0.2
Hoxc9P09633 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc9P09633 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC13.78□□□□□ -0.2
Hoxc9P09633 Gm21963-201ENSMUST00000179519 330 ntBASIC13.78□□□□□ -0.2
Hoxc9P09633 Gm7672-201ENSMUST00000180915 872 ntBASIC13.78□□□□□ -0.2
Hoxc9P09633 Mir6396-201ENSMUST00000183603 111 ntBASIC13.78□□□□□ -0.2
Hoxc9P09633 E330020D12Rik-203ENSMUST00000188717 766 ntTSL 2 BASIC13.78□□□□□ -0.2
Hoxc9P09633 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc9P09633 Gm37390-201ENSMUST00000192452 872 ntBASIC13.78□□□□□ -0.2
Hoxc9P09633 Gm37232-201ENSMUST00000194887 367 ntBASIC13.78□□□□□ -0.2
Hoxc9P09633 Gm38321-201ENSMUST00000195053 235 ntBASIC13.78□□□□□ -0.2
Hoxc9P09633 Gm6069-201ENSMUST00000196501 463 ntBASIC13.78□□□□□ -0.2
Hoxc9P09633 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Hoxc9P09633 Gm44017-201ENSMUST00000203231 740 ntTSL 5 BASIC13.78□□□□□ -0.2
Hoxc9P09633 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Hoxc9P09633 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC13.78□□□□□ -0.2
Hoxc9P09633 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC13.78□□□□□ -0.2
Hoxc9P09633 AC102327.1-201ENSMUST00000226389 742 ntBASIC13.78□□□□□ -0.2
Hoxc9P09633 Myl10-201ENSMUST00000005611 688 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc9P09633 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc9P09633 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc9P09633 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC13.78□□□□□ -0.2
Hoxc9P09633 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc9P09633 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc9P09633 Gm7823-201ENSMUST00000120761 1623 ntBASIC13.78□□□□□ -0.2
Hoxc9P09633 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc9P09633 Klk13-201ENSMUST00000066834 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc9P09633 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc9P09633 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Hoxc9P09633 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc9P09633 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc9P09633 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc9P09633 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc9P09633 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Hoxc9P09633 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hoxc9P09633 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Hoxc9P09633 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hoxc9P09633 Igkv3-9-201ENSMUST00000103398 359 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Hoxc9P09633 Gm24066-201ENSMUST00000104515 131 ntBASIC13.77□□□□□ -0.21
Hoxc9P09633 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc9P09633 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC13.77□□□□□ -0.21
Hoxc9P09633 Gm12420-201ENSMUST00000119869 1048 ntBASIC13.77□□□□□ -0.21
Hoxc9P09633 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC13.77□□□□□ -0.21
Hoxc9P09633 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc9P09633 D430040D24Rik-201ENSMUST00000149224 910 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc9P09633 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Hoxc9P09633 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Hoxc9P09633 Gm17797-201ENSMUST00000182175 997 ntBASIC13.77□□□□□ -0.21
Hoxc9P09633 Gm26978-201ENSMUST00000182843 304 ntTSL 3 BASIC13.77□□□□□ -0.21
Hoxc9P09633 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC13.77□□□□□ -0.21
Hoxc9P09633 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC13.77□□□□□ -0.21
Hoxc9P09633 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC13.77□□□□□ -0.21
Hoxc9P09633 AC161877.1-201ENSMUST00000227736 699 ntBASIC13.77□□□□□ -0.21
Hoxc9P09633 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc9P09633 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc9P09633 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc9P09633 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc9P09633 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Hoxc9P09633 Gm8991-201ENSMUST00000073014 1075 ntBASIC13.77□□□□□ -0.21
Hoxc9P09633 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc9P09633 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc9P09633 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc9P09633 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc9P09633 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc9P09633 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc9P09633 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc9P09633 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc9P09633 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxc9P09633 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC13.76□□□□□ -0.21
Hoxc9P09633 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxc9P09633 Btn2a2-204ENSMUST00000223877 2109 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Hoxc9P09633 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC13.76□□□□□ -0.21
Hoxc9P09633 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Hoxc9P09633 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxc9P09633 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxc9P09633 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxc9P09633 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxc9P09633 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxc9P09633 Lyrm1-204ENSMUST00000106518 875 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Hoxc9P09633 Gm14853-201ENSMUST00000116081 549 ntBASIC13.76□□□□□ -0.21
Hoxc9P09633 Gm11573-201ENSMUST00000119956 394 ntBASIC13.76□□□□□ -0.21
Hoxc9P09633 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC13.76□□□□□ -0.21
Hoxc9P09633 Gm12927-201ENSMUST00000150252 373 ntTSL 2 BASIC13.76□□□□□ -0.21
Hoxc9P09633 Gm23432-201ENSMUST00000157181 131 ntBASIC13.76□□□□□ -0.21
Hoxc9P09633 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC13.76□□□□□ -0.21
Hoxc9P09633 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxc9P09633 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxc9P09633 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxc9P09633 Gm42449-201ENSMUST00000200349 2258 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 743.2 ms