Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm14740-201ENSMUST00000118538 1150 ntBASIC8.76□□□□□ -1.01
Hmgb3O54879 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Hmgb3O54879 Gm7985-201ENSMUST00000183329 981 ntBASIC8.76□□□□□ -1.01
Hmgb3O54879 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC8.76□□□□□ -1.01
Hmgb3O54879 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC8.76□□□□□ -1.01
Hmgb3O54879 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC8.76□□□□□ -1.01
Hmgb3O54879 Gm44262-201ENSMUST00000204969 372 ntBASIC8.76□□□□□ -1.01
Hmgb3O54879 Gm8913-201ENSMUST00000209491 641 ntBASIC8.76□□□□□ -1.01
Hmgb3O54879 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC8.76□□□□□ -1.01
Hmgb3O54879 AC151275.1-201ENSMUST00000224870 585 ntBASIC8.76□□□□□ -1.01
Hmgb3O54879 Cts7-204ENSMUST00000225321 1257 ntBASIC8.76□□□□□ -1.01
Hmgb3O54879 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 AC154436.1-201ENSMUST00000227272 782 ntBASIC8.76□□□□□ -1.01
Hmgb3O54879 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Hmgb3O54879 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC8.76□□□□□ -1.01
Hmgb3O54879 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Hmgb3O54879 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC8.76□□□□□ -1.01
Hmgb3O54879 Gm42851-201ENSMUST00000201325 1411 ntBASIC8.76□□□□□ -1.01
Hmgb3O54879 Trim9-211ENSMUST00000223160 3574 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Hmgb3O54879 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC8.76□□□□□ -1.01
Hmgb3O54879 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Wiz-203ENSMUST00000087703 4175 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Hmgb3O54879 Sdhaf3-201ENSMUST00000040826 4323 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Lmbrd1-206ENSMUST00000191471 4453 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Stk26-201ENSMUST00000033444 3639 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC8.76□□□□□ -1.01
Hmgb3O54879 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Gm13126-201ENSMUST00000117079 3063 ntBASIC8.76□□□□□ -1.01
Hmgb3O54879 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Hmgb3O54879 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC8.76□□□□□ -1.01
Hmgb3O54879 Pla2r1-201ENSMUST00000112525 7112 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Dgcr2-204ENSMUST00000117945 4003 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC8.76□□□□□ -1.01
Hmgb3O54879 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb3O54879 Cldn12-207ENSMUST00000179804 3752 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
Hmgb3O54879 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC8.75□□□□□ -1.01
Hmgb3O54879 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Hmgb3O54879 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb3O54879 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb3O54879 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb3O54879 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb3O54879 Thsd1-201ENSMUST00000069828 4422 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb3O54879 Gm9915-201ENSMUST00000066196 1383 ntBASIC8.75□□□□□ -1.01
Hmgb3O54879 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC8.75□□□□□ -1.01
Hmgb3O54879 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb3O54879 Gm45867-201ENSMUST00000208201 2317 ntBASIC8.75□□□□□ -1.01
Hmgb3O54879 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb3O54879 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb3O54879 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb3O54879 Nkiras1-202ENSMUST00000132374 4598 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb3O54879 Gm10390-202ENSMUST00000181905 4269 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb3O54879 Nup210l-202ENSMUST00000200410 5710 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Hmgb3O54879 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb3O54879 Gm4760-201ENSMUST00000119663 1030 ntBASIC8.75□□□□□ -1.01
Hmgb3O54879 Gm8566-201ENSMUST00000120174 465 ntBASIC8.75□□□□□ -1.01
Hmgb3O54879 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC8.75□□□□□ -1.01
Hmgb3O54879 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC8.75□□□□□ -1.01
Hmgb3O54879 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC8.75□□□□□ -1.01
Hmgb3O54879 Gm18734-201ENSMUST00000172937 808 ntBASIC8.75□□□□□ -1.01
Hmgb3O54879 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC8.75□□□□□ -1.01
Hmgb3O54879 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb3O54879 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC8.75□□□□□ -1.01
Hmgb3O54879 Gm7895-201ENSMUST00000187459 1173 ntBASIC8.75□□□□□ -1.01
Hmgb3O54879 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC8.75□□□□□ -1.01
Hmgb3O54879 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC8.75□□□□□ -1.01
Hmgb3O54879 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC8.75□□□□□ -1.01
Hmgb3O54879 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb3O54879 Gm43916-201ENSMUST00000205062 967 ntBASIC8.75□□□□□ -1.01
Hmgb3O54879 Gm6108-201ENSMUST00000208365 367 ntBASIC8.75□□□□□ -1.01
Hmgb3O54879 Gm45865-201ENSMUST00000211815 945 ntBASIC8.75□□□□□ -1.01
Hmgb3O54879 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb3O54879 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb3O54879 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb3O54879 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC8.75□□□□□ -1.01
Hmgb3O54879 AC118639.2-201ENSMUST00000226289 223 ntBASIC8.75□□□□□ -1.01
Hmgb3O54879 CT025602.2-201ENSMUST00000226553 772 ntBASIC8.75□□□□□ -1.01
Hmgb3O54879 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb3O54879 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb3O54879 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Hmgb3O54879 D030055H07Rik-201ENSMUST00000143956 2712 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb3O54879 Adamtsl3-203ENSMUST00000173287 7249 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Hmgb3O54879 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb3O54879 Stx8-201ENSMUST00000021285 4394 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb3O54879 Rph3a-204ENSMUST00000202406 4096 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb3O54879 Mrpl51-201ENSMUST00000032485 3427 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb3O54879 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb3O54879 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb3O54879 Duoxa1-203ENSMUST00000110538 2467 ntTSL 5 BASIC8.75□□□□□ -1.01
Hmgb3O54879 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 128.4 ms