Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Gm11427-201ENSMUST00000117952 1696 ntBASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Sept2-215ENSMUST00000179353 3219 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Fcrla-203ENSMUST00000159171 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 H2-M10.4-201ENSMUST00000057502 1410 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Gm44415-201ENSMUST00000204151 2112 ntBASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Gm24066-201ENSMUST00000104515 131 ntBASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Gm17250-201ENSMUST00000180494 1010 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Gm17815-201ENSMUST00000198305 895 ntBASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Gm44204-201ENSMUST00000204722 737 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Gm5189-201ENSMUST00000221796 261 ntBASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Iqcf5-201ENSMUST00000085113 551 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc180J3QNE4 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc180J3QNE4 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc180J3QNE4 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC19.23■□□□□ 0.67
Ccdc180J3QNE4 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc180J3QNE4 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc180J3QNE4 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc180J3QNE4 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc180J3QNE4 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc180J3QNE4 Gm13303-201ENSMUST00000117125 1284 ntBASIC19.23■□□□□ 0.67
Ccdc180J3QNE4 Eif4a-ps4-201ENSMUST00000122226 1218 ntBASIC19.23■□□□□ 0.67
Ccdc180J3QNE4 Gm44805-201ENSMUST00000127648 765 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc180J3QNE4 Gm7211-201ENSMUST00000172692 1118 ntBASIC19.23■□□□□ 0.67
Ccdc180J3QNE4 Gm38145-201ENSMUST00000192319 693 ntBASIC19.23■□□□□ 0.67
Ccdc180J3QNE4 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC19.23■□□□□ 0.67
Ccdc180J3QNE4 Krtap21-1-201ENSMUST00000078422 748 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ccdc180J3QNE4 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc180J3QNE4 Gm15383-201ENSMUST00000121889 1443 ntBASIC19.23■□□□□ 0.67
Ccdc180J3QNE4 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc180J3QNE4 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc180J3QNE4 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc180J3QNE4 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc180J3QNE4 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc180J3QNE4 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc180J3QNE4 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc180J3QNE4 Gm42706-201ENSMUST00000199733 1910 ntBASIC19.22■□□□□ 0.67
Ccdc180J3QNE4 Mbnl1-203ENSMUST00000191747 4046 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc180J3QNE4 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc180J3QNE4 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC19.22■□□□□ 0.67
Ccdc180J3QNE4 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc180J3QNE4 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc180J3QNE4 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc180J3QNE4 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc180J3QNE4 Gm9075-201ENSMUST00000168738 794 ntBASIC19.22■□□□□ 0.67
Ccdc180J3QNE4 Gm5873-201ENSMUST00000177157 1066 ntBASIC19.22■□□□□ 0.67
Ccdc180J3QNE4 Mir6981-201ENSMUST00000184293 115 ntBASIC19.22■□□□□ 0.67
Ccdc180J3QNE4 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC19.22■□□□□ 0.67
Ccdc180J3QNE4 Gm42764-201ENSMUST00000197835 741 ntTSL 5 BASIC19.22■□□□□ 0.67
Ccdc180J3QNE4 Pcbd1-202ENSMUST00000218005 361 ntTSL 3 BASIC19.22■□□□□ 0.67
Ccdc180J3QNE4 3830406C13Rik-205ENSMUST00000223702 900 ntBASIC19.22■□□□□ 0.67
Ccdc180J3QNE4 AC166061.1-201ENSMUST00000225163 1138 ntBASIC19.22■□□□□ 0.67
Ccdc180J3QNE4 Hdac9-208ENSMUST00000211107 1683 ntTSL 5 BASIC19.22■□□□□ 0.67
Ccdc180J3QNE4 Cct2-201ENSMUST00000047672 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc180J3QNE4 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc180J3QNE4 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc180J3QNE4 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc180J3QNE4 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc180J3QNE4 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc180J3QNE4 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc180J3QNE4 Ppp1r9a-206ENSMUST00000175962 3769 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc180J3QNE4 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc180J3QNE4 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc180J3QNE4 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc180J3QNE4 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ccdc180J3QNE4 Pfkfb3-215ENSMUST00000183869 1478 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc180J3QNE4 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ccdc180J3QNE4 Gm14829-201ENSMUST00000121499 1138 ntBASIC19.21■□□□□ 0.67
Ccdc180J3QNE4 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC19.21■□□□□ 0.67
Ccdc180J3QNE4 Gm35299-201ENSMUST00000195865 421 ntTSL 3 BASIC19.21■□□□□ 0.67
Ccdc180J3QNE4 Gm18894-201ENSMUST00000198794 694 ntBASIC19.21■□□□□ 0.67
Ccdc180J3QNE4 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc180J3QNE4 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ccdc180J3QNE4 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc180J3QNE4 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ccdc180J3QNE4 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC19.21■□□□□ 0.67
Ccdc180J3QNE4 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc180J3QNE4 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC19.21■□□□□ 0.67
Ccdc180J3QNE4 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc180J3QNE4 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms