Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm28309-201ENSMUST00000136302 623 ntTSL 5 BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Gm26483-201ENSMUST00000158016 104 ntBASIC10.79□□□□□ -0.68
Col4a6B1AVK5 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Gm21577-201ENSMUST00000190823 697 ntBASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Gm20802-201ENSMUST00000190832 698 ntBASIC10.79□□□□□ -0.68
Col4a6B1AVK5 1700063D05Rik-203ENSMUST00000191461 666 ntTSL 2 BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Gm45225-201ENSMUST00000206852 1139 ntBASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Slc51b-201ENSMUST00000065894 709 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Gm22982-201ENSMUST00000082613 319 ntBASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 AC125351.1-201ENSMUST00000221438 2223 ntBASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Tmem254c-201ENSMUST00000100818 1066 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Apoo-201ENSMUST00000113895 1173 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Gm5400-201ENSMUST00000118494 943 ntBASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Rnasek-203ENSMUST00000141880 465 ntTSL 2 BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 1700057H15Rik-202ENSMUST00000143859 704 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Naa38-204ENSMUST00000144531 671 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Gm16350-201ENSMUST00000162958 446 ntTSL 2 BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Gm20455-201ENSMUST00000174100 1138 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Rbp2-204ENSMUST00000189446 803 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 A430073D23Rik-201ENSMUST00000196262 665 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Fam162b-201ENSMUST00000020064 646 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Gm43761-201ENSMUST00000202132 991 ntBASIC10.79□□□□□ -0.68
Col4a6B1AVK5 AC192333.3-201ENSMUST00000224041 463 ntBASIC10.79□□□□□ -0.68
Col4a6B1AVK5 AC158122.1-201ENSMUST00000227398 673 ntBASIC10.79□□□□□ -0.68
Col4a6B1AVK5 AC156016.4-201ENSMUST00000227470 647 ntBASIC10.79□□□□□ -0.68
Col4a6B1AVK5 BC048562-201ENSMUST00000057265 690 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Rps4l-ps-201ENSMUST00000059737 768 ntBASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Ptgr2-201ENSMUST00000123614 3168 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Zfp133-ps-201ENSMUST00000119058 1802 ntBASIC10.78□□□□□ -0.68
Col4a6B1AVK5 4833420G17Rik-201ENSMUST00000026519 2565 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Ttll7-203ENSMUST00000106134 2664 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Mir704-201ENSMUST00000102106 77 ntBASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Wdr17-204ENSMUST00000129132 1043 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Elof1-201ENSMUST00000013966 888 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Gm12415-201ENSMUST00000141637 512 ntTSL 3 BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Gm25426-201ENSMUST00000157606 170 ntBASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Gm15664-201ENSMUST00000160167 184 ntBASIC10.78□□□□□ -0.68
Col4a6B1AVK5 2410141K09Rik-204ENSMUST00000173583 515 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Gm19121-201ENSMUST00000215720 1022 ntBASIC10.78□□□□□ -0.68
Col4a6B1AVK5 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 AC113282.4-201ENSMUST00000225273 903 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 AC102523.2-201ENSMUST00000227813 983 ntBASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Grxcr2-201ENSMUST00000097591 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.78□□□□□ -0.68
Col4a6B1AVK5 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Col4a6B1AVK5 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms