Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Gm26670-202ENSMUST00000226862 340 ntBASIC10.38□□□□□ -0.75
Otud1Q9CUB6 AC132918.1-201ENSMUST00000227877 925 ntBASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 AC124732.3-201ENSMUST00000221835 1765 ntBASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Gm15784-201ENSMUST00000120260 1462 ntBASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Selenot-ps-201ENSMUST00000119098 593 ntBASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Gm13487-201ENSMUST00000122240 864 ntBASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Gm24241-201ENSMUST00000157787 145 ntBASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Gm37678-201ENSMUST00000192908 1146 ntBASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Gm42433-201ENSMUST00000196806 940 ntBASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Gm31274-201ENSMUST00000197356 229 ntBASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Gm18706-201ENSMUST00000210053 1066 ntBASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Gm7959-201ENSMUST00000221823 1078 ntBASIC10.37□□□□□ -0.75
Otud1Q9CUB6 CT030166.5-201ENSMUST00000222249 420 ntBASIC10.37□□□□□ -0.75
Otud1Q9CUB6 AC154515.3-201ENSMUST00000225081 1159 ntBASIC10.37□□□□□ -0.75
Otud1Q9CUB6 AC154572.1-201ENSMUST00000226098 1204 ntBASIC10.37□□□□□ -0.75
Otud1Q9CUB6 AC133517.2-201ENSMUST00000226820 690 ntBASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Gm5766-201ENSMUST00000160520 1977 ntBASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Gm19027-201ENSMUST00000187291 1355 ntBASIC10.37□□□□□ -0.75
Otud1Q9CUB6 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Otud1Q9CUB6 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otud1Q9CUB6 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Otud1Q9CUB6 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.36□□□□□ -0.75
Otud1Q9CUB6 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otud1Q9CUB6 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Otud1Q9CUB6 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Otud1Q9CUB6 Gm43981-201ENSMUST00000203285 1467 ntBASIC10.36□□□□□ -0.75
Otud1Q9CUB6 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otud1Q9CUB6 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Otud1Q9CUB6 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Otud1Q9CUB6 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Otud1Q9CUB6 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otud1Q9CUB6 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otud1Q9CUB6 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Otud1Q9CUB6 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Otud1Q9CUB6 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otud1Q9CUB6 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Otud1Q9CUB6 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Otud1Q9CUB6 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Otud1Q9CUB6 Gm12788-201ENSMUST00000119090 308 ntBASIC10.36□□□□□ -0.75
Otud1Q9CUB6 Gm6027-201ENSMUST00000121467 756 ntBASIC10.36□□□□□ -0.75
Otud1Q9CUB6 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC10.36□□□□□ -0.75
Otud1Q9CUB6 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otud1Q9CUB6 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC10.36□□□□□ -0.75
Otud1Q9CUB6 Gm5529-201ENSMUST00000165691 891 ntBASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms