Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Msra-204ENSMUST00000210363 1042 ntTSL 5 BASIC10.52□□□□□ -0.72
Cdh23Q99PF4 AC107851.1-201ENSMUST00000215982 417 ntTSL 2 BASIC10.52□□□□□ -0.72
Cdh23Q99PF4 Gm18041-201ENSMUST00000218210 618 ntBASIC10.52□□□□□ -0.72
Cdh23Q99PF4 AC123692.1-201ENSMUST00000227514 730 ntBASIC10.52□□□□□ -0.72
Cdh23Q99PF4 Opn1mw-201ENSMUST00000033771 1227 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cdh23Q99PF4 Tex43-201ENSMUST00000035640 565 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cdh23Q99PF4 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Cdh23Q99PF4 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cdh23Q99PF4 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Cdh23Q99PF4 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cdh23Q99PF4 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cdh23Q99PF4 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Cdh23Q99PF4 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Plekha5-206ENSMUST00000203774 1912 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Gm7180-201ENSMUST00000121753 513 ntBASIC10.52□□□□□ -0.73
Cdh23Q99PF4 4930401O10Rik-201ENSMUST00000128489 787 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Gm18339-201ENSMUST00000218074 888 ntBASIC10.52□□□□□ -0.73
Cdh23Q99PF4 CT030732.1-201ENSMUST00000226885 246 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Gm8256-202ENSMUST00000227964 828 ntBASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Gm11100-201ENSMUST00000112652 1951 ntTSL 5 BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Gemin8-201ENSMUST00000056410 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 AC151903.1-201ENSMUST00000226677 1423 ntBASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Gm11225-201ENSMUST00000118903 1049 ntBASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Bdh2-202ENSMUST00000120397 1172 ntTSL 5 BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Gm11959-201ENSMUST00000148655 723 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Vmn2r-ps31-201ENSMUST00000176474 760 ntBASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Ucma-205ENSMUST00000195688 554 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Pramef12-201ENSMUST00000030326 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Cdc25b-201ENSMUST00000028804 3089 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Gm11961-201ENSMUST00000135775 1319 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Hdac9-208ENSMUST00000211107 1683 ntTSL 5 BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Trim9-211ENSMUST00000223160 3574 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Clgn-201ENSMUST00000002259 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdh23Q99PF4 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Nsg2-202ENSMUST00000093219 1974 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Gm16077-201ENSMUST00000121915 655 ntBASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Gm14225-201ENSMUST00000142310 539 ntTSL 2 BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Gm5710-201ENSMUST00000183020 995 ntBASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Gm5788-201ENSMUST00000220499 435 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Prpf38a-201ENSMUST00000079213 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Calcoco2-201ENSMUST00000068686 1621 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Gps2-203ENSMUST00000116358 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Ctdp1-203ENSMUST00000161003 1199 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Mir6354-201ENSMUST00000184979 116 ntBASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Gm38132-201ENSMUST00000193358 707 ntTSL 3 BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Gm5150-202ENSMUST00000194367 1212 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.51□□□□□ -0.73
Cdh23Q99PF4 AC159244.2-201ENSMUST00000222051 220 ntTSL 3 BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 CT009539.1-201ENSMUST00000226465 220 ntBASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Gm13864-201ENSMUST00000119745 785 ntBASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Cox6c-201ENSMUST00000014457 503 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Anp32e-207ENSMUST00000170125 413 ntTSL 3 BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Il19-204ENSMUST00000187916 720 ntTSL 2 BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Gm43787-201ENSMUST00000197792 1037 ntBASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Tcstv3-202ENSMUST00000223967 779 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Rpl7a-ps8-201ENSMUST00000094754 801 ntBASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cdh23Q99PF4 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Gm10339-202ENSMUST00000181509 1691 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Gm16304-201ENSMUST00000129972 775 ntBASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Gm27403-201ENSMUST00000184662 214 ntBASIC10.5□□□□□ -0.73
Cdh23Q99PF4 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms