Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smim3Q99PE5 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC9.01□□□□□ -0.97
Smim3Q99PE5 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Smim3Q99PE5 Snora78-201ENSMUST00000158630 128 ntBASIC9.01□□□□□ -0.97
Smim3Q99PE5 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Smim3Q99PE5 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC9.01□□□□□ -0.97
Smim3Q99PE5 Gm23694-201ENSMUST00000179335 110 ntBASIC9.01□□□□□ -0.97
Smim3Q99PE5 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smim3Q99PE5 Gm29543-201ENSMUST00000188138 967 ntBASIC9.01□□□□□ -0.97
Smim3Q99PE5 Gm28071-201ENSMUST00000190355 478 ntBASIC9.01□□□□□ -0.97
Smim3Q99PE5 Gm9728-201ENSMUST00000200197 1055 ntBASIC9.01□□□□□ -0.97
Smim3Q99PE5 Gm44551-201ENSMUST00000208804 171 ntBASIC9.01□□□□□ -0.97
Smim3Q99PE5 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC9.01□□□□□ -0.97
Smim3Q99PE5 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC9.01□□□□□ -0.97
Smim3Q99PE5 Prim1-201ENSMUST00000026461 1583 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smim3Q99PE5 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smim3Q99PE5 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smim3Q99PE5 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smim3Q99PE5 Gm53-204ENSMUST00000150490 3257 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Smim3Q99PE5 Erc1-203ENSMUST00000183703 8760 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smim3Q99PE5 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC9.01□□□□□ -0.97
Smim3Q99PE5 Tsc2-203ENSMUST00000226284 6266 ntAPPRIS ALT2 BASIC9.01□□□□□ -0.97
Smim3Q99PE5 Mthfd1-206ENSMUST00000220046 3040 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Smim3Q99PE5 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Smim3Q99PE5 Tmprss13-201ENSMUST00000034597 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smim3Q99PE5 Lrrk2-201ENSMUST00000060642 8275 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smim3Q99PE5 Stk36-202ENSMUST00000087186 4065 ntTSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 Wdhd1-201ENSMUST00000111790 2962 ntTSL 2 BASIC9□□□□□ -0.97
Smim3Q99PE5 Synj2-207ENSMUST00000115788 3498 ntTSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 Zmiz2-204ENSMUST00000109786 4319 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
Smim3Q99PE5 3632454L22Rik-202ENSMUST00000153610 2872 ntTSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 Uhrf1-204ENSMUST00000113039 3391 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 Cacna1c-208ENSMUST00000187317 6663 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Smim3Q99PE5 Gm12097-201ENSMUST00000121523 1414 ntBASIC9□□□□□ -0.97
Smim3Q99PE5 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Smim3Q99PE5 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 Rnft1-201ENSMUST00000020827 4452 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 Slc22a21-201ENSMUST00000076493 3461 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 Dock4-204ENSMUST00000220912 7360 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 Tbx4-202ENSMUST00000108045 2959 ntTSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC9□□□□□ -0.97
Smim3Q99PE5 Gm12241-201ENSMUST00000118330 726 ntBASIC9□□□□□ -0.97
Smim3Q99PE5 Gm15554-201ENSMUST00000120406 913 ntBASIC9□□□□□ -0.97
Smim3Q99PE5 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC9□□□□□ -0.97
Smim3Q99PE5 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC9□□□□□ -0.97
Smim3Q99PE5 Scfd2-208ENSMUST00000151474 3834 ntTSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC9□□□□□ -0.97
Smim3Q99PE5 Gm3150-201ENSMUST00000166418 204 ntBASIC9□□□□□ -0.97
Smim3Q99PE5 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC9□□□□□ -0.97
Smim3Q99PE5 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC9□□□□□ -0.97
Smim3Q99PE5 Gm29067-201ENSMUST00000190821 470 ntBASIC9□□□□□ -0.97
Smim3Q99PE5 Gm6334-201ENSMUST00000207083 228 ntBASIC9□□□□□ -0.97
Smim3Q99PE5 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC9□□□□□ -0.97
Smim3Q99PE5 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 Vma21-202ENSMUST00000114576 4195 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 Gys1-201ENSMUST00000003964 3678 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 Gm43052-201ENSMUST00000201451 1628 ntBASIC9□□□□□ -0.97
Smim3Q99PE5 Gm45597-201ENSMUST00000211524 1994 ntBASIC9□□□□□ -0.97
Smim3Q99PE5 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC9□□□□□ -0.97
Smim3Q99PE5 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 Adra1a-205ENSMUST00000161339 2788 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 Gm9860-201ENSMUST00000211426 3653 ntBASIC9□□□□□ -0.97
Smim3Q99PE5 Hinfp-205ENSMUST00000216508 5333 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 Shc4-201ENSMUST00000042246 4059 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 Gm19656-201ENSMUST00000208543 4610 ntTSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 Hspd1-ps3-201ENSMUST00000119713 1722 ntBASIC9□□□□□ -0.97
Smim3Q99PE5 Radil-202ENSMUST00000085758 3714 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
Smim3Q99PE5 Rbm27-202ENSMUST00000091920 6266 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 AC159813.1-201ENSMUST00000222671 2263 ntTSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 Gulo-201ENSMUST00000059970 2263 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smim3Q99PE5 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC8.99□□□□□ -0.97
Smim3Q99PE5 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smim3Q99PE5 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smim3Q99PE5 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smim3Q99PE5 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC8.99□□□□□ -0.97
Smim3Q99PE5 Uvssa-201ENSMUST00000087864 7326 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smim3Q99PE5 Ccnc-201ENSMUST00000065928 3484 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smim3Q99PE5 Sap30bpos-201ENSMUST00000132264 2352 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smim3Q99PE5 Fubp1-220ENSMUST00000200524 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smim3Q99PE5 Hdac7-207ENSMUST00000120683 3701 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smim3Q99PE5 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smim3Q99PE5 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smim3Q99PE5 Gm19557-201ENSMUST00000182109 2765 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smim3Q99PE5 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smim3Q99PE5 Mmp9-201ENSMUST00000017881 3175 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smim3Q99PE5 Gm11411-201ENSMUST00000117951 719 ntBASIC8.99□□□□□ -0.97
Smim3Q99PE5 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC8.99□□□□□ -0.97
Smim3Q99PE5 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC8.99□□□□□ -0.97
Smim3Q99PE5 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC8.99□□□□□ -0.97
Smim3Q99PE5 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC8.99□□□□□ -0.97
Smim3Q99PE5 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smim3Q99PE5 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC8.99□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms