Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm15419-201ENSMUST00000148654 743 ntTSL 3 BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Gm25154-201ENSMUST00000157123 119 ntBASIC13.23□□□□□ -0.29
RtcbQ99LF4 Gm23479-201ENSMUST00000158876 122 ntBASIC13.23□□□□□ -0.29
RtcbQ99LF4 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Gm4866-201ENSMUST00000197408 589 ntBASIC13.23□□□□□ -0.29
RtcbQ99LF4 AC156274.1-201ENSMUST00000219193 634 ntBASIC13.23□□□□□ -0.29
RtcbQ99LF4 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC13.23□□□□□ -0.29
RtcbQ99LF4 AC134860.5-201ENSMUST00000225071 1249 ntBASIC13.23□□□□□ -0.29
RtcbQ99LF4 Phf5a-201ENSMUST00000023117 864 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Gm5292-201ENSMUST00000073317 580 ntBASIC13.23□□□□□ -0.29
RtcbQ99LF4 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Gm6727-201ENSMUST00000204102 1518 ntBASIC13.23□□□□□ -0.29
RtcbQ99LF4 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RtcbQ99LF4 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RtcbQ99LF4 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RtcbQ99LF4 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RtcbQ99LF4 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RtcbQ99LF4 Gm14538-201ENSMUST00000122019 1327 ntBASIC13.22□□□□□ -0.29
RtcbQ99LF4 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RtcbQ99LF4 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RtcbQ99LF4 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC13.22□□□□□ -0.29
RtcbQ99LF4 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RtcbQ99LF4 Gm24981-201ENSMUST00000104459 132 ntBASIC13.22□□□□□ -0.29
RtcbQ99LF4 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RtcbQ99LF4 Maats1os-201ENSMUST00000133496 326 ntTSL 3 BASIC13.22□□□□□ -0.29
RtcbQ99LF4 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC13.22□□□□□ -0.29
RtcbQ99LF4 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC13.22□□□□□ -0.29
RtcbQ99LF4 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RtcbQ99LF4 Gm4430-202ENSMUST00000193902 1041 ntBASIC13.22□□□□□ -0.29
RtcbQ99LF4 Gm34248-201ENSMUST00000200027 474 ntBASIC13.22□□□□□ -0.29
RtcbQ99LF4 AC164614.1-201ENSMUST00000216038 397 ntBASIC13.22□□□□□ -0.29
RtcbQ99LF4 Gm8768-201ENSMUST00000220020 826 ntBASIC13.22□□□□□ -0.29
RtcbQ99LF4 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
RtcbQ99LF4 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RtcbQ99LF4 Xlr4b-201ENSMUST00000069077 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RtcbQ99LF4 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RtcbQ99LF4 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RtcbQ99LF4 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
RtcbQ99LF4 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RtcbQ99LF4 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RtcbQ99LF4 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RtcbQ99LF4 AC153380.1-201ENSMUST00000214959 2364 ntBASIC13.22□□□□□ -0.29
RtcbQ99LF4 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RtcbQ99LF4 AC158777.1-201ENSMUST00000226216 1724 ntBASIC13.22□□□□□ -0.29
RtcbQ99LF4 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
RtcbQ99LF4 Gm37582-201ENSMUST00000192953 1409 ntBASIC13.22□□□□□ -0.29
RtcbQ99LF4 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RtcbQ99LF4 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.21□□□□□ -0.29
RtcbQ99LF4 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RtcbQ99LF4 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RtcbQ99LF4 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC13.21□□□□□ -0.29
RtcbQ99LF4 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RtcbQ99LF4 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.21□□□□□ -0.29
RtcbQ99LF4 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
RtcbQ99LF4 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RtcbQ99LF4 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
RtcbQ99LF4 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.21□□□□□ -0.29
RtcbQ99LF4 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
RtcbQ99LF4 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RtcbQ99LF4 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RtcbQ99LF4 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RtcbQ99LF4 Gm16439-201ENSMUST00000100687 564 ntBASIC13.21□□□□□ -0.29
RtcbQ99LF4 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC13.21□□□□□ -0.29
RtcbQ99LF4 Gm15702-201ENSMUST00000119680 444 ntBASIC13.21□□□□□ -0.29
RtcbQ99LF4 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RtcbQ99LF4 Gm21963-201ENSMUST00000179519 330 ntBASIC13.21□□□□□ -0.29
RtcbQ99LF4 1700030N03Rik-206ENSMUST00000191405 651 ntTSL 3 BASIC13.21□□□□□ -0.29
RtcbQ99LF4 Gm7812-201ENSMUST00000203479 874 ntBASIC13.21□□□□□ -0.29
RtcbQ99LF4 Gm45363-201ENSMUST00000210196 1294 ntBASIC13.21□□□□□ -0.29
RtcbQ99LF4 Gm18749-201ENSMUST00000222410 692 ntBASIC13.21□□□□□ -0.29
RtcbQ99LF4 Gm25483-201ENSMUST00000083224 227 ntBASIC13.21□□□□□ -0.29
RtcbQ99LF4 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RtcbQ99LF4 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RtcbQ99LF4 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC13.21□□□□□ -0.29
RtcbQ99LF4 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
RtcbQ99LF4 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RtcbQ99LF4 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RtcbQ99LF4 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC13.21□□□□□ -0.29
RtcbQ99LF4 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
RtcbQ99LF4 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
RtcbQ99LF4 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
RtcbQ99LF4 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
RtcbQ99LF4 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms