Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Gm44155-201ENSMUST00000203923 412 ntBASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Gm45310-201ENSMUST00000210436 275 ntBASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 AC154276.3-201ENSMUST00000227643 998 ntBASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 AC131330.1-201ENSMUST00000227814 1015 ntBASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Cish-201ENSMUST00000085102 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Mc4r-201ENSMUST00000057942 2758 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Taf8-201ENSMUST00000067103 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Gm12097-201ENSMUST00000121523 1414 ntBASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Gm12709-201ENSMUST00000149348 1912 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Stau1-202ENSMUST00000109235 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Platr9-202ENSMUST00000149572 1556 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Gm8899-201ENSMUST00000214635 1332 ntBASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nhlrc3Q8CCH2 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Nhlrc3Q8CCH2 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
Nhlrc3Q8CCH2 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
Nhlrc3Q8CCH2 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Nhlrc3Q8CCH2 Pmel-201ENSMUST00000054125 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Nhlrc3Q8CCH2 Zscan21-202ENSMUST00000080732 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Nhlrc3Q8CCH2 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Gm19027-201ENSMUST00000187291 1355 ntBASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Dcun1d4-201ENSMUST00000063882 4116 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Gm37975-201ENSMUST00000195494 2099 ntBASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Gm17831-201ENSMUST00000205579 900 ntBASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 CT025679.1-201ENSMUST00000227106 449 ntBASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 A630012P03Rik-202ENSMUST00000114854 1974 ntTSL 5 BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Mcm5-205ENSMUST00000212811 2653 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Tec-203ENSMUST00000113594 2580 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Gm7405-201ENSMUST00000121476 1337 ntBASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Car12-201ENSMUST00000071889 3716 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nhlrc3Q8CCH2 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms