Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Gm18555-201ENSMUST00000197935 584 ntBASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Gm3926-201ENSMUST00000223378 1123 ntBASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 AC161172.1-201ENSMUST00000227801 486 ntBASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Gm12397-201ENSMUST00000117674 615 ntBASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Gm6686-201ENSMUST00000178455 258 ntBASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Gm11942-201ENSMUST00000180255 345 ntBASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Gm27833-201ENSMUST00000184285 124 ntBASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Gm5865-201ENSMUST00000198713 637 ntBASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 AC124581.2-201ENSMUST00000225459 282 ntBASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 AC138716.2-201ENSMUST00000226670 1016 ntBASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Mir326-201ENSMUST00000083637 95 ntBASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sh3rf2Q8BZT2 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Gm42432-201ENSMUST00000197902 1617 ntBASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Gm25604-201ENSMUST00000158359 133 ntBASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms