Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm5449-201ENSMUST00000081132 357 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 AC022682.1-201ENSMUST00000224624 2023 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Vps54Q5SPW0 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Vps54Q5SPW0 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Vps54Q5SPW0 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Gm1826-201ENSMUST00000118646 1162 ntBASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Mir6387-201ENSMUST00000184042 108 ntBASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Gm37452-201ENSMUST00000194416 1160 ntBASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 AC157650.1-201ENSMUST00000224582 610 ntBASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Mir194-2-201ENSMUST00000083648 86 ntBASIC12.83□□□□□ -0.36
Vps54Q5SPW0 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Vps54Q5SPW0 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps54Q5SPW0 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps54Q5SPW0 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps54Q5SPW0 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Vps54Q5SPW0 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps54Q5SPW0 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps54Q5SPW0 AC108416.1-201ENSMUST00000228755 1558 ntBASIC12.82□□□□□ -0.36
Vps54Q5SPW0 Gm42587-201ENSMUST00000198462 1981 ntBASIC12.82□□□□□ -0.36
Vps54Q5SPW0 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps54Q5SPW0 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Vps54Q5SPW0 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps54Q5SPW0 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC12.82□□□□□ -0.36
Vps54Q5SPW0 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Vps54Q5SPW0 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC12.82□□□□□ -0.36
Vps54Q5SPW0 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps54Q5SPW0 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC12.82□□□□□ -0.36
Vps54Q5SPW0 AC161172.1-201ENSMUST00000227801 486 ntBASIC12.82□□□□□ -0.36
Vps54Q5SPW0 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps54Q5SPW0 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps54Q5SPW0 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps54Q5SPW0 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps54Q5SPW0 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps54Q5SPW0 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps54Q5SPW0 Gm13169-201ENSMUST00000122090 1459 ntBASIC12.82□□□□□ -0.36
Vps54Q5SPW0 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps54Q5SPW0 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps54Q5SPW0 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Vps54Q5SPW0 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps54Q5SPW0 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps54Q5SPW0 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Vps54Q5SPW0 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Vps54Q5SPW0 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps54Q5SPW0 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Gm38344-201ENSMUST00000195306 1353 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms