Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Gm24990-201ENSMUST00000157406 323 ntBASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Gm25043-201ENSMUST00000158604 212 ntBASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Gm7985-201ENSMUST00000183329 981 ntBASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Mir6979-201ENSMUST00000183927 56 ntBASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Gm42867-201ENSMUST00000202995 469 ntBASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 AC121960.1-201ENSMUST00000227982 564 ntBASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Gm25125-201ENSMUST00000083340 136 ntBASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Plscr2-205ENSMUST00000180154 1900 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Gm28424-201ENSMUST00000187393 1319 ntBASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Gm8862-201ENSMUST00000198379 1346 ntBASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Slc6a16-203ENSMUST00000213347 2865 ntAPPRIS P5 TSL 5 BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Tgm7-201ENSMUST00000110675 2151 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Wdr37-212ENSMUST00000176922 3780 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Wdr24-201ENSMUST00000026833 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Gm43839-201ENSMUST00000196183 2325 ntBASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Pds5a-201ENSMUST00000031104 4146 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Gm15455-201ENSMUST00000117459 2557 ntBASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 4933407K13Rik-203ENSMUST00000138943 4364 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Nadsyn1-201ENSMUST00000033415 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Fbxo38-201ENSMUST00000048688 4388 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Gm6768-201ENSMUST00000022467 1878 ntBASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Casp8-202ENSMUST00000165549 1917 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Gm37671-201ENSMUST00000193198 2096 ntBASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Brcc3-201ENSMUST00000033544 4310 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Dlgap4-202ENSMUST00000070782 3303 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Gm9860-201ENSMUST00000211426 3653 ntBASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Snord17-201ENSMUST00000104526 238 ntBASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Gm11989-201ENSMUST00000117240 672 ntBASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Gm11511-201ENSMUST00000118146 540 ntBASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Gm11362-201ENSMUST00000118838 850 ntBASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Gm12012-201ENSMUST00000118857 1066 ntBASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Mup-ps29-201ENSMUST00000122281 202 ntBASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Gm22846-201ENSMUST00000157706 270 ntBASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Gm27953-201ENSMUST00000185171 143 ntBASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Gm2553-201ENSMUST00000215986 605 ntBASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Osbpl5-201ENSMUST00000020411 3994 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Aoc1-203ENSMUST00000162948 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 C6-204ENSMUST00000162585 2876 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Sema4d-203ENSMUST00000110040 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Slc35f6-201ENSMUST00000062962 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccbe1Q3MI99 Rassf5-202ENSMUST00000068564 3076 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms