Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Gm18539-201ENSMUST00000204745 1090 ntBASIC12.7□□□□□ -0.38
Chrna5Q2MKA5 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC12.7□□□□□ -0.38
Chrna5Q2MKA5 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC12.7□□□□□ -0.38
Chrna5Q2MKA5 Cxcl3-201ENSMUST00000031326 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna5Q2MKA5 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna5Q2MKA5 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna5Q2MKA5 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Chrna5Q2MKA5 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna5Q2MKA5 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna5Q2MKA5 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.7□□□□□ -0.38
Chrna5Q2MKA5 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna5Q2MKA5 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna5Q2MKA5 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna5Q2MKA5 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna5Q2MKA5 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna5Q2MKA5 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Chrna5Q2MKA5 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna5Q2MKA5 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna5Q2MKA5 Gm45170-201ENSMUST00000206746 1671 ntBASIC12.7□□□□□ -0.38
Chrna5Q2MKA5 Gm21142-201ENSMUST00000179999 2604 ntBASIC12.7□□□□□ -0.38
Chrna5Q2MKA5 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna5Q2MKA5 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna5Q2MKA5 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Chrna5Q2MKA5 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Gstm6-204ENSMUST00000106684 1179 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Gm13792-201ENSMUST00000121350 423 ntBASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 E330020D12Rik-203ENSMUST00000188717 766 ntTSL 2 BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Gm37141-201ENSMUST00000191938 422 ntBASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Gm44460-201ENSMUST00000196179 129 ntBASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Gm32098-201ENSMUST00000211305 479 ntTSL 5 BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 AC157650.1-201ENSMUST00000224582 610 ntBASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 CT025642.1-201ENSMUST00000224734 1219 ntBASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Olfr578-201ENSMUST00000056235 942 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Gm7190-201ENSMUST00000118669 1452 ntBASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna5Q2MKA5 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 AC130671.3-201ENSMUST00000227393 1897 ntBASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 1700028K03Rik-202ENSMUST00000159902 742 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 Gm17147-201ENSMUST00000164176 432 ntBASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 Gm1758-201ENSMUST00000164528 606 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 Gm25694-201ENSMUST00000175448 282 ntBASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 Mir8104-201ENSMUST00000185165 101 ntBASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 Gm7812-201ENSMUST00000203479 874 ntBASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 Gm8768-201ENSMUST00000220020 826 ntBASIC12.68□□□□□ -0.38
Chrna5Q2MKA5 Gm5194-201ENSMUST00000221457 742 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms