Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Ebf1Q07802 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
Ebf1Q07802 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Ebf1Q07802 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Ebf1Q07802 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Gm24933-201ENSMUST00000103762 110 ntBASIC10.92□□□□□ -0.66
Ebf1Q07802 Gm23252-201ENSMUST00000103776 110 ntBASIC10.92□□□□□ -0.66
Ebf1Q07802 Gm23439-201ENSMUST00000104292 132 ntBASIC10.92□□□□□ -0.66
Ebf1Q07802 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC10.92□□□□□ -0.66
Ebf1Q07802 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC10.92□□□□□ -0.66
Ebf1Q07802 Gm13171-201ENSMUST00000117233 391 ntBASIC10.92□□□□□ -0.66
Ebf1Q07802 Gm12028-201ENSMUST00000118065 436 ntBASIC10.92□□□□□ -0.66
Ebf1Q07802 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Ebf1Q07802 Gm20493-201ENSMUST00000173706 213 ntBASIC10.92□□□□□ -0.66
Ebf1Q07802 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC10.92□□□□□ -0.66
Ebf1Q07802 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC10.92□□□□□ -0.66
Ebf1Q07802 Gm26443-201ENSMUST00000179610 110 ntBASIC10.92□□□□□ -0.66
Ebf1Q07802 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC10.92□□□□□ -0.66
Ebf1Q07802 Mir6973a-201ENSMUST00000183646 78 ntBASIC10.92□□□□□ -0.66
Ebf1Q07802 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Gm43460-201ENSMUST00000202491 1057 ntBASIC10.92□□□□□ -0.66
Ebf1Q07802 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC10.92□□□□□ -0.66
Ebf1Q07802 Gm44605-201ENSMUST00000206892 949 ntBASIC10.92□□□□□ -0.66
Ebf1Q07802 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Ebf1Q07802 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Ebf1Q07802 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Ebf1Q07802 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Ebf1Q07802 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Ebf1Q07802 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC10.92□□□□□ -0.66
Ebf1Q07802 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ebf1Q07802 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Ebf1Q07802 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ebf1Q07802 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Ebf1Q07802 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ebf1Q07802 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC10.91□□□□□ -0.66
Ebf1Q07802 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ebf1Q07802 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 AC090962.2-201ENSMUST00000225064 1801 ntBASIC10.91□□□□□ -0.66
Ebf1Q07802 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Ebf1Q07802 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.91□□□□□ -0.66
Ebf1Q07802 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 Gm12947-201ENSMUST00000116114 420 ntBASIC10.91□□□□□ -0.66
Ebf1Q07802 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Ebf1Q07802 Gm15707-201ENSMUST00000118804 996 ntBASIC10.91□□□□□ -0.66
Ebf1Q07802 Gm15982-201ENSMUST00000121681 554 ntBASIC10.91□□□□□ -0.66
Ebf1Q07802 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC10.91□□□□□ -0.66
Ebf1Q07802 Cd9-ps-201ENSMUST00000174687 650 ntBASIC10.91□□□□□ -0.66
Ebf1Q07802 Gm5210-201ENSMUST00000182150 1010 ntBASIC10.91□□□□□ -0.66
Ebf1Q07802 Gm43564-201ENSMUST00000196185 211 ntBASIC10.91□□□□□ -0.66
Ebf1Q07802 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.91□□□□□ -0.66
Ebf1Q07802 Gm45258-201ENSMUST00000210042 853 ntBASIC10.91□□□□□ -0.66
Ebf1Q07802 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC10.91□□□□□ -0.66
Ebf1Q07802 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Ebf1Q07802 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ebf1Q07802 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms