Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm10731-201ENSMUST00000181171 448 ntBASIC11.85□□□□□ -0.51
Hmgb1P63158 Gm5210-201ENSMUST00000182150 1010 ntBASIC11.85□□□□□ -0.51
Hmgb1P63158 Gm19927-201ENSMUST00000185792 781 ntBASIC11.85□□□□□ -0.51
Hmgb1P63158 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC11.85□□□□□ -0.51
Hmgb1P63158 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.85□□□□□ -0.51
Hmgb1P63158 Gm6677-201ENSMUST00000195100 441 ntBASIC11.85□□□□□ -0.51
Hmgb1P63158 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.85□□□□□ -0.51
Hmgb1P63158 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Hmgb1P63158 Gm18466-201ENSMUST00000209147 499 ntBASIC11.85□□□□□ -0.51
Hmgb1P63158 BX649293.1-201ENSMUST00000227437 631 ntBASIC11.85□□□□□ -0.51
Hmgb1P63158 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Hmgb1P63158 Gm43274-201ENSMUST00000202545 5000 ntBASIC11.85□□□□□ -0.51
Hmgb1P63158 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmgb1P63158 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmgb1P63158 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Hmgb1P63158 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmgb1P63158 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hmgb1P63158 Phtf1os-201ENSMUST00000160110 4046 ntBASIC11.85□□□□□ -0.51
Hmgb1P63158 Gm19680-201ENSMUST00000095050 1513 ntBASIC11.85□□□□□ -0.51
Hmgb1P63158 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hmgb1P63158 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hmgb1P63158 AC154171.3-201ENSMUST00000224519 2505 ntBASIC11.85□□□□□ -0.51
Hmgb1P63158 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Hmgb1P63158 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.85□□□□□ -0.51
Hmgb1P63158 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmgb1P63158 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Hmgb1P63158 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmgb1P63158 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hmgb1P63158 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Hmgb1P63158 Gm37902-201ENSMUST00000192839 1683 ntBASIC11.84□□□□□ -0.51
Hmgb1P63158 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmgb1P63158 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmgb1P63158 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC11.84□□□□□ -0.51
Hmgb1P63158 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmgb1P63158 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Hmgb1P63158 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmgb1P63158 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmgb1P63158 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmgb1P63158 AC122367.1-201ENSMUST00000221978 1709 ntBASIC11.84□□□□□ -0.51
Hmgb1P63158 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Hmgb1P63158 Gm11331-201ENSMUST00000119764 288 ntBASIC11.84□□□□□ -0.51
Hmgb1P63158 Gm13019-201ENSMUST00000120000 276 ntBASIC11.84□□□□□ -0.51
Hmgb1P63158 Gm14746-201ENSMUST00000120309 741 ntBASIC11.84□□□□□ -0.51
Hmgb1P63158 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.84□□□□□ -0.51
Hmgb1P63158 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hmgb1P63158 Gm5244-201ENSMUST00000164001 339 ntBASIC11.84□□□□□ -0.51
Hmgb1P63158 Gm23771-201ENSMUST00000178702 110 ntBASIC11.84□□□□□ -0.51
Hmgb1P63158 Gm27910-201ENSMUST00000185004 107 ntBASIC11.84□□□□□ -0.51
Hmgb1P63158 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Hmgb1P63158 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.84□□□□□ -0.51
Hmgb1P63158 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hmgb1P63158 Gm44155-201ENSMUST00000203923 412 ntBASIC11.84□□□□□ -0.51
Hmgb1P63158 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.84□□□□□ -0.51
Hmgb1P63158 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.84□□□□□ -0.51
Hmgb1P63158 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.84□□□□□ -0.51
Hmgb1P63158 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11.84□□□□□ -0.51
Hmgb1P63158 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmgb1P63158 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmgb1P63158 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hmgb1P63158 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hmgb1P63158 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmgb1P63158 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmgb1P63158 Tcf7l2-208ENSMUST00000111654 3059 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Hmgb1P63158 Gm43143-201ENSMUST00000196083 2023 ntBASIC11.84□□□□□ -0.51
Hmgb1P63158 Gm21039-201ENSMUST00000223359 2012 ntBASIC11.84□□□□□ -0.51
Hmgb1P63158 Gm7933-201ENSMUST00000191215 2255 ntBASIC11.84□□□□□ -0.51
Hmgb1P63158 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmgb1P63158 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmgb1P63158 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hmgb1P63158 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hmgb1P63158 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmgb1P63158 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Hmgb1P63158 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Hmgb1P63158 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Hmgb1P63158 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgb1P63158 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Hmgb1P63158 Gm15953-201ENSMUST00000117656 1732 ntBASIC11.83□□□□□ -0.52
Hmgb1P63158 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgb1P63158 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgb1P63158 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Hmgb1P63158 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgb1P63158 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgb1P63158 Irf2-201ENSMUST00000034041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgb1P63158 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC11.83□□□□□ -0.52
Hmgb1P63158 Sox5-205ENSMUST00000111749 3879 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgb1P63158 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.83□□□□□ -0.52
Hmgb1P63158 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgb1P63158 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgb1P63158 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Hmgb1P63158 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgb1P63158 Gm25766-201ENSMUST00000104101 131 ntBASIC11.83□□□□□ -0.52
Hmgb1P63158 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Hmgb1P63158 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Hmgb1P63158 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgb1P63158 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.83□□□□□ -0.52
Hmgb1P63158 Gm14892-201ENSMUST00000117636 267 ntBASIC11.83□□□□□ -0.52
Hmgb1P63158 Gm12337-201ENSMUST00000119634 400 ntBASIC11.83□□□□□ -0.52
Hmgb1P63158 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC11.83□□□□□ -0.52
Hmgb1P63158 Gm25554-201ENSMUST00000158075 113 ntBASIC11.83□□□□□ -0.52
Hmgb1P63158 Gm20426-201ENSMUST00000173657 440 ntBASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms