Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm40289-201ENSMUST00000201470 2268 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm3P62311 Eif2ak4-205ENSMUST00000110872 4907 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm3P62311 Slc28a2-202ENSMUST00000110524 2836 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm3P62311 Tomm40l-203ENSMUST00000111327 2812 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm3P62311 Kif23-201ENSMUST00000034815 3398 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm3P62311 Myo1c-202ENSMUST00000102504 4659 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm3P62311 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm3P62311 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm3P62311 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Lsm3P62311 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm3P62311 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm3P62311 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm3P62311 Ryr1-208ENSMUST00000214374 15300 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Lsm3P62311 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC9.62□□□□□ -0.87
Lsm3P62311 Gm12218-201ENSMUST00000117666 399 ntBASIC9.62□□□□□ -0.87
Lsm3P62311 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm3P62311 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm3P62311 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC9.62□□□□□ -0.87
Lsm3P62311 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC9.62□□□□□ -0.87
Lsm3P62311 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC9.62□□□□□ -0.87
Lsm3P62311 Gm19246-201ENSMUST00000173599 255 ntBASIC9.62□□□□□ -0.87
Lsm3P62311 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm3P62311 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC9.62□□□□□ -0.87
Lsm3P62311 Gm45784-201ENSMUST00000188360 142 ntBASIC9.62□□□□□ -0.87
Lsm3P62311 Gm38002-201ENSMUST00000193255 180 ntBASIC9.62□□□□□ -0.87
Lsm3P62311 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC9.62□□□□□ -0.87
Lsm3P62311 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC9.62□□□□□ -0.87
Lsm3P62311 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm3P62311 AC118639.2-201ENSMUST00000226289 223 ntBASIC9.62□□□□□ -0.87
Lsm3P62311 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm3P62311 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Lsm3P62311 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm3P62311 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Lsm3P62311 Fes-208ENSMUST00000206728 2707 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm3P62311 Gm38054-201ENSMUST00000192380 2167 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm3P62311 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm3P62311 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Lsm3P62311 Ctage5-220ENSMUST00000177225 2872 ntTSL 5 BASIC9.62□□□□□ -0.87
Lsm3P62311 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm3P62311 Tfap2b-201ENSMUST00000027059 5863 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm3P62311 Il16-201ENSMUST00000001792 5260 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm3P62311 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm3P62311 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm3P62311 AC157476.2-201ENSMUST00000217574 3200 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Arhgap45-203ENSMUST00000105373 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Gm43915-201ENSMUST00000203013 5037 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Gm28138-201ENSMUST00000186250 2167 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Gm29270-201ENSMUST00000188071 2167 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Gm29392-201ENSMUST00000189429 2167 ntTSL 5 BASIC9.61□□□□□ -0.87
Lsm3P62311 Gm29252-201ENSMUST00000189869 2167 ntTSL 5 BASIC9.61□□□□□ -0.87
Lsm3P62311 Gm29305-201ENSMUST00000191054 2167 ntTSL 5 BASIC9.61□□□□□ -0.87
Lsm3P62311 Gm43366-201ENSMUST00000199829 2655 ntBASIC9.61□□□□□ -0.87
Lsm3P62311 Gm8862-201ENSMUST00000198379 1346 ntBASIC9.61□□□□□ -0.87
Lsm3P62311 AC114008.2-201ENSMUST00000227699 1347 ntBASIC9.61□□□□□ -0.87
Lsm3P62311 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Pik3c3-203ENSMUST00000115812 3257 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Gm44699-201ENSMUST00000208229 5083 ntTSL 5 BASIC9.61□□□□□ -0.87
Lsm3P62311 Cipc-205ENSMUST00000187814 4098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Cipc-201ENSMUST00000038369 4098 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Gm43052-201ENSMUST00000201451 1628 ntBASIC9.61□□□□□ -0.87
Lsm3P62311 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Ddhd2-201ENSMUST00000033975 4245 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Gm42638-201ENSMUST00000196065 2587 ntBASIC9.61□□□□□ -0.87
Lsm3P62311 Ppfia1-202ENSMUST00000182226 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Lsm3P62311 Glb1l2-202ENSMUST00000066560 3688 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Lsm3P62311 Gm12857-201ENSMUST00000117678 592 ntBASIC9.61□□□□□ -0.87
Lsm3P62311 Gm15554-201ENSMUST00000120406 913 ntBASIC9.61□□□□□ -0.87
Lsm3P62311 Gm11793-201ENSMUST00000120433 981 ntBASIC9.61□□□□□ -0.87
Lsm3P62311 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC9.61□□□□□ -0.87
Lsm3P62311 Gm8885-201ENSMUST00000189382 598 ntBASIC9.61□□□□□ -0.87
Lsm3P62311 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC9.61□□□□□ -0.87
Lsm3P62311 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC9.61□□□□□ -0.87
Lsm3P62311 Aprt-ps-201ENSMUST00000212311 505 ntBASIC9.61□□□□□ -0.87
Lsm3P62311 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Lsm3P62311 Nat8f5-201ENSMUST00000032074 986 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Lsm3P62311 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Gm12097-201ENSMUST00000121523 1414 ntBASIC9.61□□□□□ -0.87
Lsm3P62311 Phf21a-204ENSMUST00000111290 6332 ntTSL 5 BASIC9.61□□□□□ -0.87
Lsm3P62311 Phf21a-203ENSMUST00000090586 6310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Olfr130-203ENSMUST00000217390 5959 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Lsm3P62311 Mpp2-201ENSMUST00000017458 4089 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Syt2-201ENSMUST00000121990 6879 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Gpatch8-206ENSMUST00000143842 6871 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Lsm3P62311 AC121870.2-201ENSMUST00000214343 1870 ntBASIC9.61□□□□□ -0.87
Lsm3P62311 Zfp568-204ENSMUST00000177931 2013 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Lsm3P62311 Smoc1-201ENSMUST00000021564 3439 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Alox8-201ENSMUST00000021262 3226 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 Cdkl1-201ENSMUST00000021377 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm3P62311 AC154849.3-201ENSMUST00000223733 1660 ntBASIC9.61□□□□□ -0.87
Lsm3P62311 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms