Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC10.15□□□□□ -0.78
Nup43P59235 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC10.15□□□□□ -0.78
Nup43P59235 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC10.15□□□□□ -0.78
Nup43P59235 Gm25226-201ENSMUST00000158198 123 ntBASIC10.15□□□□□ -0.78
Nup43P59235 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC10.15□□□□□ -0.78
Nup43P59235 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Nup43P59235 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nup43P59235 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Nup43P59235 Gm37597-201ENSMUST00000191853 382 ntBASIC10.15□□□□□ -0.78
Nup43P59235 Gm19918-201ENSMUST00000194858 400 ntBASIC10.15□□□□□ -0.78
Nup43P59235 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC10.15□□□□□ -0.78
Nup43P59235 Gm18059-201ENSMUST00000208073 580 ntBASIC10.15□□□□□ -0.78
Nup43P59235 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nup43P59235 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC10.15□□□□□ -0.78
Nup43P59235 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC10.15□□□□□ -0.78
Nup43P59235 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC10.15□□□□□ -0.78
Nup43P59235 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC10.15□□□□□ -0.78
Nup43P59235 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Nup43P59235 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nup43P59235 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Nup43P59235 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Nup43P59235 Gm7536-201ENSMUST00000077389 444 ntBASIC10.15□□□□□ -0.78
Nup43P59235 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Nup43P59235 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nup43P59235 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nup43P59235 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC10.15□□□□□ -0.78
Nup43P59235 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nup43P59235 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nup43P59235 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nup43P59235 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Nup43P59235 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nup43P59235 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Nup43P59235 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nup43P59235 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Nup43P59235 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Nup43P59235 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Nup43P59235 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Nup43P59235 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Nup43P59235 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Nup43P59235 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Nup43P59235 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Nup43P59235 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
Nup43P59235 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Nup43P59235 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Nup43P59235 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Nup43P59235 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Nup43P59235 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC10.14□□□□□ -0.79
Nup43P59235 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Nup43P59235 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Nup43P59235 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Nup43P59235 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.14□□□□□ -0.79
Nup43P59235 Ighv13-1-201ENSMUST00000103480 294 ntBASIC10.14□□□□□ -0.79
Nup43P59235 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Nup43P59235 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Nup43P59235 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC10.14□□□□□ -0.79
Nup43P59235 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC10.14□□□□□ -0.79
Nup43P59235 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC10.14□□□□□ -0.79
Nup43P59235 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Nup43P59235 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Nup43P59235 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC10.14□□□□□ -0.79
Nup43P59235 Gm42833-201ENSMUST00000196019 2124 ntBASIC10.14□□□□□ -0.79
Nup43P59235 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC10.14□□□□□ -0.79
Nup43P59235 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC10.14□□□□□ -0.79
Nup43P59235 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC10.14□□□□□ -0.79
Nup43P59235 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC10.14□□□□□ -0.79
Nup43P59235 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Nup43P59235 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Nup43P59235 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Nup43P59235 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms