Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm11502-201ENSMUST00000120917 1211 ntBASIC11.34□□□□□ -0.59
Shmt1P50431 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt1P50431 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC11.34□□□□□ -0.59
Shmt1P50431 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC11.34□□□□□ -0.59
Shmt1P50431 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt1P50431 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC11.34□□□□□ -0.59
Shmt1P50431 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC11.34□□□□□ -0.59
Shmt1P50431 Gm28671-201ENSMUST00000187036 692 ntBASIC11.34□□□□□ -0.59
Shmt1P50431 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC11.34□□□□□ -0.59
Shmt1P50431 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt1P50431 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC11.34□□□□□ -0.59
Shmt1P50431 Gm19640-201ENSMUST00000214849 464 ntBASIC11.34□□□□□ -0.59
Shmt1P50431 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC11.34□□□□□ -0.59
Shmt1P50431 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt1P50431 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt1P50431 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt1P50431 Gm25514-201ENSMUST00000083860 135 ntBASIC11.34□□□□□ -0.59
Shmt1P50431 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC11.34□□□□□ -0.59
Shmt1P50431 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt1P50431 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.34□□□□□ -0.59
Shmt1P50431 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt1P50431 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Shmt1P50431 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt1P50431 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt1P50431 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt1P50431 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.34□□□□□ -0.59
Shmt1P50431 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt1P50431 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt1P50431 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt1P50431 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt1P50431 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Shmt1P50431 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt1P50431 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.59
Shmt1P50431 Gm37160-201ENSMUST00000193081 1689 ntBASIC11.33□□□□□ -0.6
Shmt1P50431 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt1P50431 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt1P50431 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt1P50431 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.33□□□□□ -0.6
Shmt1P50431 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Shmt1P50431 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Shmt1P50431 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt1P50431 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Shmt1P50431 Gm12912-201ENSMUST00000121596 1381 ntBASIC11.33□□□□□ -0.6
Shmt1P50431 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt1P50431 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt1P50431 Gm11957-201ENSMUST00000118304 779 ntBASIC11.33□□□□□ -0.6
Shmt1P50431 Mir1896-201ENSMUST00000122641 81 ntBASIC11.33□□□□□ -0.6
Shmt1P50431 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC11.33□□□□□ -0.6
Shmt1P50431 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC11.33□□□□□ -0.6
Shmt1P50431 Gm25569-201ENSMUST00000157175 131 ntBASIC11.33□□□□□ -0.6
Shmt1P50431 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC11.33□□□□□ -0.6
Shmt1P50431 Gm5801-201ENSMUST00000182247 780 ntBASIC11.33□□□□□ -0.6
Shmt1P50431 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt1P50431 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC11.33□□□□□ -0.6
Shmt1P50431 Gm29763-201ENSMUST00000205306 616 ntBASIC11.33□□□□□ -0.6
Shmt1P50431 Gm44640-201ENSMUST00000206894 247 ntBASIC11.33□□□□□ -0.6
Shmt1P50431 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt1P50431 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC11.33□□□□□ -0.6
Shmt1P50431 AC154806.7-201ENSMUST00000227998 202 ntBASIC11.33□□□□□ -0.6
Shmt1P50431 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC11.33□□□□□ -0.6
Shmt1P50431 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt1P50431 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt1P50431 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Shmt1P50431 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt1P50431 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.33□□□□□ -0.6
Shmt1P50431 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt1P50431 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt1P50431 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt1P50431 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt1P50431 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt1P50431 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt1P50431 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt1P50431 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt1P50431 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.33□□□□□ -0.6
Shmt1P50431 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt1P50431 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt1P50431 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt1P50431 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Shmt1P50431 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Shmt1P50431 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Shmt1P50431 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
Shmt1P50431 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Shmt1P50431 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Shmt1P50431 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Shmt1P50431 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Shmt1P50431 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms