Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm18555-201ENSMUST00000197935 584 ntBASIC10.18□□□□□ -0.78
Nkx2-6P43688 Gm5340-201ENSMUST00000203733 880 ntBASIC10.18□□□□□ -0.78
Nkx2-6P43688 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Gm7192-201ENSMUST00000210793 1137 ntBASIC10.18□□□□□ -0.78
Nkx2-6P43688 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Gm25125-201ENSMUST00000083340 136 ntBASIC10.18□□□□□ -0.78
Nkx2-6P43688 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.18□□□□□ -0.78
Nkx2-6P43688 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Gm37160-201ENSMUST00000193081 1689 ntBASIC10.18□□□□□ -0.78
Nkx2-6P43688 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Gm8019-201ENSMUST00000119317 587 ntBASIC10.17□□□□□ -0.78
Nkx2-6P43688 Gm5909-201ENSMUST00000119768 1281 ntBASIC10.17□□□□□ -0.78
Nkx2-6P43688 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.17□□□□□ -0.78
Nkx2-6P43688 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-6P43688 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Gm24954-201ENSMUST00000178831 110 ntBASIC10.17□□□□□ -0.78
Nkx2-6P43688 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Gm7255-201ENSMUST00000187371 908 ntBASIC10.17□□□□□ -0.78
Nkx2-6P43688 Gm7445-201ENSMUST00000192115 340 ntBASIC10.17□□□□□ -0.78
Nkx2-6P43688 Gm42779-201ENSMUST00000198807 406 ntBASIC10.17□□□□□ -0.78
Nkx2-6P43688 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-6P43688 AC121567.1-201ENSMUST00000227213 842 ntBASIC10.17□□□□□ -0.78
Nkx2-6P43688 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Nkx2-6P43688 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-6P43688 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Nkx2-6P43688 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Nkx2-6P43688 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-6P43688 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.16□□□□□ -0.78
Nkx2-6P43688 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.16□□□□□ -0.78
Nkx2-6P43688 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-6P43688 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Nkx2-6P43688 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Nkx2-6P43688 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-6P43688 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-6P43688 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-6P43688 Gm5472-201ENSMUST00000178604 1678 ntBASIC10.16□□□□□ -0.78
Nkx2-6P43688 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC10.16□□□□□ -0.78
Nkx2-6P43688 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Nkx2-6P43688 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.16□□□□□ -0.78
Nkx2-6P43688 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-6P43688 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-6P43688 Gm22495-201ENSMUST00000104492 126 ntBASIC10.16□□□□□ -0.78
Nkx2-6P43688 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Nkx2-6P43688 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC10.16□□□□□ -0.78
Nkx2-6P43688 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Nkx2-6P43688 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC10.16□□□□□ -0.78
Nkx2-6P43688 Mir1249-201ENSMUST00000116791 98 ntBASIC10.16□□□□□ -0.78
Nkx2-6P43688 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC10.16□□□□□ -0.78
Nkx2-6P43688 Gm5764-201ENSMUST00000118817 885 ntBASIC10.16□□□□□ -0.78
Nkx2-6P43688 Gm6441-201ENSMUST00000120983 696 ntBASIC10.16□□□□□ -0.78
Nkx2-6P43688 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms