Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl12P40224 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Cxcl12P40224 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl12P40224 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.03□□□□□ -0.64
Cxcl12P40224 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl12P40224 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl12P40224 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl12P40224 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl12P40224 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl12P40224 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl12P40224 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl12P40224 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cxcl12P40224 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC11.02□□□□□ -0.64
Cxcl12P40224 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cxcl12P40224 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cxcl12P40224 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cxcl12P40224 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cxcl12P40224 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cxcl12P40224 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl12P40224 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl12P40224 Pfkfb3-215ENSMUST00000183869 1478 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl12P40224 Gm7001-201ENSMUST00000219384 1465 ntBASIC11.02□□□□□ -0.65
Cxcl12P40224 AC154575.1-201ENSMUST00000227166 1474 ntBASIC11.02□□□□□ -0.65
Cxcl12P40224 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl12P40224 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl12P40224 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl12P40224 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl12P40224 Gm14021-201ENSMUST00000117683 961 ntBASIC11.02□□□□□ -0.65
Cxcl12P40224 Gm11629-201ENSMUST00000123784 384 ntTSL 3 BASIC11.02□□□□□ -0.65
Cxcl12P40224 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC11.02□□□□□ -0.65
Cxcl12P40224 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC11.02□□□□□ -0.65
Cxcl12P40224 Gm7251-201ENSMUST00000182661 1009 ntBASIC11.02□□□□□ -0.65
Cxcl12P40224 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC11.02□□□□□ -0.65
Cxcl12P40224 Mir8104-201ENSMUST00000185165 101 ntBASIC11.02□□□□□ -0.65
Cxcl12P40224 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Cxcl12P40224 Gm29157-201ENSMUST00000188753 612 ntBASIC11.02□□□□□ -0.65
Cxcl12P40224 Gm2328-201ENSMUST00000193525 535 ntBASIC11.02□□□□□ -0.65
Cxcl12P40224 4930515G16Rik-201ENSMUST00000199440 1256 ntBASIC11.02□□□□□ -0.65
Cxcl12P40224 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC11.02□□□□□ -0.65
Cxcl12P40224 Gm32772-203ENSMUST00000207022 675 ntTSL 3 BASIC11.02□□□□□ -0.65
Cxcl12P40224 Gm44658-201ENSMUST00000207965 637 ntBASIC11.02□□□□□ -0.65
Cxcl12P40224 Gm6426-201ENSMUST00000209048 854 ntBASIC11.02□□□□□ -0.65
Cxcl12P40224 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC11.02□□□□□ -0.65
Cxcl12P40224 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.02□□□□□ -0.65
Cxcl12P40224 8030423J24Rik-201ENSMUST00000022091 869 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl12P40224 CR974487.1-201ENSMUST00000220984 413 ntBASIC11.02□□□□□ -0.65
Cxcl12P40224 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC11.02□□□□□ -0.65
Cxcl12P40224 AC154461.3-201ENSMUST00000224831 573 ntBASIC11.02□□□□□ -0.65
Cxcl12P40224 AC164978.2-201ENSMUST00000226645 857 ntBASIC11.02□□□□□ -0.65
Cxcl12P40224 Gm25125-201ENSMUST00000083340 136 ntBASIC11.02□□□□□ -0.65
Cxcl12P40224 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.02□□□□□ -0.65
Cxcl12P40224 Gm6727-201ENSMUST00000204102 1518 ntBASIC11.02□□□□□ -0.65
Cxcl12P40224 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl12P40224 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cxcl12P40224 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC11.02□□□□□ -0.65
Cxcl12P40224 Foxm1-201ENSMUST00000073316 4652 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl12P40224 Gm28453-201ENSMUST00000185556 1323 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl12P40224 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.02□□□□□ -0.65
Cxcl12P40224 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl12P40224 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl12P40224 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.02□□□□□ -0.65
Cxcl12P40224 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC11.01□□□□□ -0.65
Cxcl12P40224 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cxcl12P40224 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cxcl12P40224 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.01□□□□□ -0.65
Cxcl12P40224 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcl12P40224 Ifna6-201ENSMUST00000105146 570 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cxcl12P40224 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Cxcl12P40224 Dtymk-203ENSMUST00000112893 1040 ntTSL 2 BASIC11.01□□□□□ -0.65
Cxcl12P40224 Gm14853-201ENSMUST00000116081 549 ntBASIC11.01□□□□□ -0.65
Cxcl12P40224 Nsa2-ps2-201ENSMUST00000120785 773 ntBASIC11.01□□□□□ -0.65
Cxcl12P40224 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC11.01□□□□□ -0.65
Cxcl12P40224 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcl12P40224 Faap24-203ENSMUST00000154597 831 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Cxcl12P40224 Gm3355-201ENSMUST00000160079 487 ntBASIC11.01□□□□□ -0.65
Cxcl12P40224 Gm1758-201ENSMUST00000164528 606 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cxcl12P40224 Ifna11-201ENSMUST00000170428 573 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cxcl12P40224 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC11.01□□□□□ -0.65
Cxcl12P40224 Gm5627-201ENSMUST00000178539 931 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcl12P40224 Gm26698-201ENSMUST00000181290 971 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcl12P40224 Gm8824-201ENSMUST00000182962 990 ntBASIC11.01□□□□□ -0.65
Cxcl12P40224 Crip1-206ENSMUST00000200553 516 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Cxcl12P40224 AC165249.1-203ENSMUST00000219976 392 ntTSL 2 BASIC11.01□□□□□ -0.65
Cxcl12P40224 AC132881.1-201ENSMUST00000223780 1062 ntBASIC11.01□□□□□ -0.65
Cxcl12P40224 AC122459.4-201ENSMUST00000228654 551 ntBASIC11.01□□□□□ -0.65
Cxcl12P40224 BC048562-201ENSMUST00000057265 690 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcl12P40224 Gm26205-201ENSMUST00000082907 134 ntBASIC11.01□□□□□ -0.65
Cxcl12P40224 Gm5507-201ENSMUST00000091897 1008 ntBASIC11.01□□□□□ -0.65
Cxcl12P40224 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcl12P40224 Ifna1-201ENSMUST00000094972 570 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cxcl12P40224 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcl12P40224 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcl12P40224 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cxcl12P40224 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcl12P40224 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcl12P40224 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcl12P40224 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcl12P40224 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Cxcl12P40224 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cxcl12P40224 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 126.6 ms