Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm33351-202ENSMUST00000215428 1677 ntTSL 5 BASIC15.73■□□□□ 0.11
Chd1P40201 Mterf1b-201ENSMUST00000177258 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd1P40201 Gm44629-201ENSMUST00000206951 1840 ntBASIC15.73■□□□□ 0.11
Chd1P40201 Gm12168-201ENSMUST00000119051 368 ntBASIC15.73■□□□□ 0.11
Chd1P40201 Gm14182-201ENSMUST00000119334 210 ntBASIC15.73■□□□□ 0.11
Chd1P40201 Gm6341-201ENSMUST00000119683 411 ntBASIC15.73■□□□□ 0.11
Chd1P40201 Alg13-203ENSMUST00000123710 604 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chd1P40201 Gm15347-201ENSMUST00000145372 385 ntTSL 3 BASIC15.73■□□□□ 0.11
Chd1P40201 Igkv3-11-201ENSMUST00000197500 385 ntBASIC15.73■□□□□ 0.11
Chd1P40201 Gm4275-203ENSMUST00000210214 1298 ntTSL 5 BASIC15.73■□□□□ 0.11
Chd1P40201 Msra-204ENSMUST00000210363 1042 ntTSL 5 BASIC15.73■□□□□ 0.11
Chd1P40201 CT030732.1-201ENSMUST00000226885 246 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Chd1P40201 AC113178.1-201ENSMUST00000227616 935 ntBASIC15.73■□□□□ 0.11
Chd1P40201 Lyg1-201ENSMUST00000027254 800 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Chd1P40201 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.73■□□□□ 0.11
Chd1P40201 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd1P40201 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC15.73■□□□□ 0.11
Chd1P40201 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd1P40201 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd1P40201 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chd1P40201 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chd1P40201 Gm20953-201ENSMUST00000216399 2614 ntBASIC15.72■□□□□ 0.11
Chd1P40201 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd1P40201 D330041H03Rik-207ENSMUST00000181760 1362 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chd1P40201 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chd1P40201 n-R5s2-201ENSMUST00000101968 119 ntBASIC15.72■□□□□ 0.11
Chd1P40201 n-R5s194-201ENSMUST00000104719 119 ntBASIC15.72■□□□□ 0.11
Chd1P40201 Gm5776-201ENSMUST00000122119 321 ntBASIC15.72■□□□□ 0.11
Chd1P40201 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chd1P40201 Cfap77-202ENSMUST00000157048 1042 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd1P40201 n-R5s112-201ENSMUST00000178208 119 ntBASIC15.72■□□□□ 0.11
Chd1P40201 Gm5561-201ENSMUST00000178932 480 ntBASIC15.72■□□□□ 0.11
Chd1P40201 n-R5s125-201ENSMUST00000179377 119 ntBASIC15.72■□□□□ 0.11
Chd1P40201 n-R5s120-201ENSMUST00000180000 119 ntBASIC15.72■□□□□ 0.11
Chd1P40201 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chd1P40201 AC139130.1-201ENSMUST00000228281 620 ntBASIC15.72■□□□□ 0.11
Chd1P40201 Ly6g5b-201ENSMUST00000062657 1046 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd1P40201 Tprkb-202ENSMUST00000089570 1216 ntTSL 5 BASIC15.72■□□□□ 0.11
Chd1P40201 n-R5s33-201ENSMUST00000093713 119 ntBASIC15.72■□□□□ 0.11
Chd1P40201 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd1P40201 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Chd1P40201 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chd1P40201 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd1P40201 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd1P40201 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd1P40201 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd1P40201 Rsrc2-208ENSMUST00000182309 1595 ntTSL 5 BASIC15.72■□□□□ 0.11
Chd1P40201 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chd1P40201 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Chd1P40201 Gm19817-201ENSMUST00000199764 2132 ntBASIC15.72■□□□□ 0.11
Chd1P40201 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Chd1P40201 Gm10113-201ENSMUST00000072437 3150 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chd1P40201 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd1P40201 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd1P40201 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd1P40201 Igkv14-130-201ENSMUST00000103307 350 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Chd1P40201 Ighv1-9-201ENSMUST00000103498 348 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Chd1P40201 Gm25092-201ENSMUST00000103996 129 ntBASIC15.71■□□□□ 0.11
Chd1P40201 Phyhd1-203ENSMUST00000113643 1195 ntTSL 5 BASIC15.71■□□□□ 0.11
Chd1P40201 Gm8425-201ENSMUST00000171395 769 ntBASIC15.71■□□□□ 0.11
Chd1P40201 Gm8513-201ENSMUST00000182830 1003 ntBASIC15.71■□□□□ 0.11
Chd1P40201 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Chd1P40201 Gm45538-201ENSMUST00000210771 1061 ntTSL 5 BASIC15.71■□□□□ 0.11
Chd1P40201 Gm18339-201ENSMUST00000218074 888 ntBASIC15.71■□□□□ 0.11
Chd1P40201 Sprr1a-201ENSMUST00000054599 806 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd1P40201 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd1P40201 Tefm-201ENSMUST00000050207 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd1P40201 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chd1P40201 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Chd1P40201 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd1P40201 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chd1P40201 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Chd1P40201 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd1P40201 Prdx1-204ENSMUST00000135573 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd1P40201 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd1P40201 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd1P40201 Gm14239-201ENSMUST00000116491 685 ntBASIC15.71■□□□□ 0.1
Chd1P40201 Olfr122-201ENSMUST00000119082 993 ntBASIC15.71■□□□□ 0.1
Chd1P40201 Fhad1os1-201ENSMUST00000146094 997 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Chd1P40201 Gm20455-201ENSMUST00000174100 1138 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Chd1P40201 4930432M17Rik-202ENSMUST00000196899 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chd1P40201 Gm43246-201ENSMUST00000197597 564 ntBASIC15.71■□□□□ 0.1
Chd1P40201 Gm5881-201ENSMUST00000204737 367 ntBASIC15.71■□□□□ 0.1
Chd1P40201 Gm43903-201ENSMUST00000205126 617 ntBASIC15.71■□□□□ 0.1
Chd1P40201 AC137127.2-201ENSMUST00000215086 935 ntTSL 5 BASIC15.71■□□□□ 0.1
Chd1P40201 Gm5668-201ENSMUST00000220897 436 ntBASIC15.71■□□□□ 0.1
Chd1P40201 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chd1P40201 Apom-201ENSMUST00000025249 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chd1P40201 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chd1P40201 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chd1P40201 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chd1P40201 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chd1P40201 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd1P40201 Gm29601-201ENSMUST00000187961 1349 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chd1P40201 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd1P40201 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd1P40201 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Chd1P40201 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Chd1P40201 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chd1P40201 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms