Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vcam1P29533 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC12.28□□□□□ -0.44
Vcam1P29533 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vcam1P29533 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vcam1P29533 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Vcam1P29533 Gm6727-201ENSMUST00000204102 1518 ntBASIC12.28□□□□□ -0.44
Vcam1P29533 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Vcam1P29533 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vcam1P29533 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vcam1P29533 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vcam1P29533 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC12.28□□□□□ -0.44
Vcam1P29533 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vcam1P29533 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vcam1P29533 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC12.28□□□□□ -0.44
Vcam1P29533 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vcam1P29533 Gm14639-201ENSMUST00000120850 866 ntBASIC12.28□□□□□ -0.44
Vcam1P29533 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vcam1P29533 Gm24943-201ENSMUST00000158329 433 ntBASIC12.28□□□□□ -0.44
Vcam1P29533 Gm22994-201ENSMUST00000175422 82 ntBASIC12.28□□□□□ -0.44
Vcam1P29533 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vcam1P29533 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
Vcam1P29533 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC12.28□□□□□ -0.44
Vcam1P29533 Gm7833-201ENSMUST00000183288 990 ntBASIC12.28□□□□□ -0.44
Vcam1P29533 Gm28179-201ENSMUST00000188365 613 ntBASIC12.28□□□□□ -0.44
Vcam1P29533 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Vcam1P29533 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC12.28□□□□□ -0.44
Vcam1P29533 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Vcam1P29533 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vcam1P29533 Gm29689-201ENSMUST00000221076 589 ntBASIC12.28□□□□□ -0.44
Vcam1P29533 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Vcam1P29533 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC12.28□□□□□ -0.44
Vcam1P29533 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC12.28□□□□□ -0.44
Vcam1P29533 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Vcam1P29533 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.28□□□□□ -0.44
Vcam1P29533 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vcam1P29533 Gm42587-201ENSMUST00000198462 1981 ntBASIC12.28□□□□□ -0.44
Vcam1P29533 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vcam1P29533 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vcam1P29533 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vcam1P29533 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Vcam1P29533 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vcam1P29533 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vcam1P29533 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vcam1P29533 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vcam1P29533 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Vcam1P29533 Gm45041-201ENSMUST00000207366 3108 ntBASIC12.28□□□□□ -0.44
Vcam1P29533 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vcam1P29533 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC12.28□□□□□ -0.44
Vcam1P29533 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Vcam1P29533 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vcam1P29533 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vcam1P29533 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Vcam1P29533 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Vcam1P29533 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vcam1P29533 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Vcam1P29533 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vcam1P29533 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vcam1P29533 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vcam1P29533 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vcam1P29533 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vcam1P29533 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vcam1P29533 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vcam1P29533 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Vcam1P29533 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vcam1P29533 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vcam1P29533 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vcam1P29533 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vcam1P29533 Gm13426-201ENSMUST00000117887 795 ntBASIC12.27□□□□□ -0.45
Vcam1P29533 Gm15636-201ENSMUST00000119205 668 ntBASIC12.27□□□□□ -0.45
Vcam1P29533 Gm14997-201ENSMUST00000119232 636 ntBASIC12.27□□□□□ -0.45
Vcam1P29533 Gm15793-201ENSMUST00000121857 495 ntBASIC12.27□□□□□ -0.45
Vcam1P29533 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC12.27□□□□□ -0.45
Vcam1P29533 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vcam1P29533 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC12.27□□□□□ -0.45
Vcam1P29533 Gm28391-201ENSMUST00000185202 379 ntBASIC12.27□□□□□ -0.45
Vcam1P29533 Gm29528-201ENSMUST00000186699 379 ntBASIC12.27□□□□□ -0.45
Vcam1P29533 Gm29526-201ENSMUST00000187217 379 ntBASIC12.27□□□□□ -0.45
Vcam1P29533 AC124613.1-201ENSMUST00000198711 88 ntBASIC12.27□□□□□ -0.45
Vcam1P29533 Gm19798-201ENSMUST00000201502 457 ntBASIC12.27□□□□□ -0.45
Vcam1P29533 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vcam1P29533 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC12.27□□□□□ -0.45
Vcam1P29533 AC165092.1-201ENSMUST00000224018 486 ntBASIC12.27□□□□□ -0.45
Vcam1P29533 AC134860.5-201ENSMUST00000225071 1249 ntBASIC12.27□□□□□ -0.45
Vcam1P29533 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vcam1P29533 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vcam1P29533 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vcam1P29533 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vcam1P29533 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vcam1P29533 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.27□□□□□ -0.45
Vcam1P29533 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vcam1P29533 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vcam1P29533 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vcam1P29533 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vcam1P29533 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Vcam1P29533 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vcam1P29533 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC12.26□□□□□ -0.45
Vcam1P29533 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Vcam1P29533 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms