Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC8.93□□□□□ -0.98
Col8a2P25318 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC8.93□□□□□ -0.98
Col8a2P25318 Gm5555-201ENSMUST00000120352 1111 ntBASIC8.93□□□□□ -0.98
Col8a2P25318 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC8.93□□□□□ -0.98
Col8a2P25318 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Col8a2P25318 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Gm20392-201ENSMUST00000173047 701 ntBASIC8.93□□□□□ -0.98
Col8a2P25318 Mir6923-201ENSMUST00000184592 72 ntBASIC8.93□□□□□ -0.98
Col8a2P25318 Gm8918-201ENSMUST00000190587 1087 ntBASIC8.93□□□□□ -0.98
Col8a2P25318 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC8.93□□□□□ -0.98
Col8a2P25318 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Col8a2P25318 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC8.93□□□□□ -0.98
Col8a2P25318 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 AC155300.1-201ENSMUST00000219134 480 ntBASIC8.93□□□□□ -0.98
Col8a2P25318 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC8.93□□□□□ -0.98
Col8a2P25318 AC134860.2-201ENSMUST00000225277 1036 ntBASIC8.93□□□□□ -0.98
Col8a2P25318 AC154407.1-201ENSMUST00000226777 526 ntBASIC8.93□□□□□ -0.98
Col8a2P25318 Gm26782-203ENSMUST00000227103 751 ntBASIC8.93□□□□□ -0.98
Col8a2P25318 AC154806.7-201ENSMUST00000227998 202 ntBASIC8.93□□□□□ -0.98
Col8a2P25318 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Col8a2P25318 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Col8a2P25318 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Gm37160-201ENSMUST00000193081 1689 ntBASIC8.93□□□□□ -0.98
Col8a2P25318 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
Col8a2P25318 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC8.93□□□□□ -0.98
Col8a2P25318 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Col8a2P25318 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC8.93□□□□□ -0.98
Col8a2P25318 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC8.93□□□□□ -0.98
Col8a2P25318 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Col8a2P25318 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Col8a2P25318 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
Col8a2P25318 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Col8a2P25318 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC8.92□□□□□ -0.98
Col8a2P25318 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 Gm37697-201ENSMUST00000195680 1844 ntBASIC8.92□□□□□ -0.98
Col8a2P25318 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Col8a2P25318 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 Gm42463-201ENSMUST00000198041 4886 ntBASIC8.92□□□□□ -0.98
Col8a2P25318 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC8.92□□□□□ -0.98
Col8a2P25318 Gm15036-201ENSMUST00000118880 400 ntBASIC8.92□□□□□ -0.98
Col8a2P25318 Gm12337-201ENSMUST00000119634 400 ntBASIC8.92□□□□□ -0.98
Col8a2P25318 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC8.92□□□□□ -0.98
Col8a2P25318 Gm16441-201ENSMUST00000138176 924 ntBASIC8.92□□□□□ -0.98
Col8a2P25318 Gm6038-201ENSMUST00000154310 948 ntBASIC8.92□□□□□ -0.98
Col8a2P25318 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC8.92□□□□□ -0.98
Col8a2P25318 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms