Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Gm42651-201ENSMUST00000199851 1339 ntBASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Gm38376-201ENSMUST00000195493 2253 ntBASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Casp14-201ENSMUST00000005488 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Gm43061-201ENSMUST00000198850 2241 ntBASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc180J3QNE4 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc180J3QNE4 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC19.27■□□□□ 0.68
Ccdc180J3QNE4 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc180J3QNE4 4933424L21Rik-201ENSMUST00000142486 1186 ntTSL 5 BASIC19.27■□□□□ 0.68
Ccdc180J3QNE4 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Ccdc180J3QNE4 Gm9513-201ENSMUST00000165591 306 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc180J3QNE4 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC19.27■□□□□ 0.68
Ccdc180J3QNE4 Ptma-202ENSMUST00000186255 768 ntTSL 2 BASIC19.27■□□□□ 0.68
Ccdc180J3QNE4 Ang2-202ENSMUST00000228835 896 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ccdc180J3QNE4 Vmn1r199-201ENSMUST00000091732 1104 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
Ccdc180J3QNE4 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ccdc180J3QNE4 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc180J3QNE4 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc180J3QNE4 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc180J3QNE4 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc180J3QNE4 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc180J3QNE4 Uros-204ENSMUST00000106146 1483 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc180J3QNE4 Adh1-201ENSMUST00000004232 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc180J3QNE4 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc180J3QNE4 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc180J3QNE4 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc180J3QNE4 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc180J3QNE4 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc180J3QNE4 C8b-202ENSMUST00000065072 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc180J3QNE4 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc180J3QNE4 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc180J3QNE4 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc180J3QNE4 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc180J3QNE4 Mir1190-201ENSMUST00000116925 96 ntBASIC19.27■□□□□ 0.67
Ccdc180J3QNE4 Gm12221-201ENSMUST00000125096 1131 ntBASIC19.27■□□□□ 0.67
Ccdc180J3QNE4 Gm13554-201ENSMUST00000137349 477 ntTSL 5 BASIC19.27■□□□□ 0.67
Ccdc180J3QNE4 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc180J3QNE4 Fam240a-201ENSMUST00000177678 499 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
Ccdc180J3QNE4 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC19.27■□□□□ 0.67
Ccdc180J3QNE4 E330020D12Rik-203ENSMUST00000188717 766 ntTSL 2 BASIC19.27■□□□□ 0.67
Ccdc180J3QNE4 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc180J3QNE4 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc180J3QNE4 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc180J3QNE4 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc180J3QNE4 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC19.26■□□□□ 0.67
Ccdc180J3QNE4 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc180J3QNE4 Gm14853-201ENSMUST00000116081 549 ntBASIC19.26■□□□□ 0.67
Ccdc180J3QNE4 Mir1896-201ENSMUST00000122641 81 ntBASIC19.26■□□□□ 0.67
Ccdc180J3QNE4 Gm25804-201ENSMUST00000122785 188 ntBASIC19.26■□□□□ 0.67
Ccdc180J3QNE4 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc180J3QNE4 Mir3091-201ENSMUST00000175086 76 ntBASIC19.26■□□□□ 0.67
Ccdc180J3QNE4 Gm24180-201ENSMUST00000179961 110 ntBASIC19.26■□□□□ 0.67
Ccdc180J3QNE4 Mir6396-201ENSMUST00000183603 111 ntBASIC19.26■□□□□ 0.67
Ccdc180J3QNE4 Gm6069-201ENSMUST00000196501 463 ntBASIC19.26■□□□□ 0.67
Ccdc180J3QNE4 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC19.26■□□□□ 0.67
Ccdc180J3QNE4 Olfr1349-201ENSMUST00000051982 1054 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ccdc180J3QNE4 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ccdc180J3QNE4 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ccdc180J3QNE4 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC19.26■□□□□ 0.67
Ccdc180J3QNE4 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc180J3QNE4 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc180J3QNE4 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc180J3QNE4 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC19.25■□□□□ 0.67
Ccdc180J3QNE4 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc180J3QNE4 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC19.25■□□□□ 0.67
Ccdc180J3QNE4 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc180J3QNE4 Pkib-204ENSMUST00000175852 731 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc180J3QNE4 Gm37144-201ENSMUST00000195445 1150 ntBASIC19.25■□□□□ 0.67
Ccdc180J3QNE4 Gm32772-203ENSMUST00000207022 675 ntTSL 3 BASIC19.25■□□□□ 0.67
Ccdc180J3QNE4 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc180J3QNE4 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ccdc180J3QNE4 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc180J3QNE4 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc180J3QNE4 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ccdc180J3QNE4 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc180J3QNE4 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc180J3QNE4 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc180J3QNE4 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc180J3QNE4 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Gm16439-201ENSMUST00000100687 564 ntBASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Gm11573-201ENSMUST00000119956 394 ntBASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Gm12737-201ENSMUST00000142835 725 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Gm26957-201ENSMUST00000182645 977 ntBASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Gm7251-201ENSMUST00000182661 1009 ntBASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Gm37232-201ENSMUST00000194887 367 ntBASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Gm5845-201ENSMUST00000195812 796 ntBASIC19.24■□□□□ 0.67
Ccdc180J3QNE4 Gm7812-201ENSMUST00000203479 874 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms