Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usf3B2RUQ2 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Usf3B2RUQ2 AC211878.3-201ENSMUST00000222629 2018 ntBASIC8.99□□□□□ -0.97
Usf3B2RUQ2 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usf3B2RUQ2 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usf3B2RUQ2 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usf3B2RUQ2 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Usf3B2RUQ2 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Usf3B2RUQ2 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usf3B2RUQ2 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usf3B2RUQ2 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usf3B2RUQ2 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Usf3B2RUQ2 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Usf3B2RUQ2 Smok4a-201ENSMUST00000074512 1455 ntBASIC8.99□□□□□ -0.97
Usf3B2RUQ2 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usf3B2RUQ2 Gm14398-201ENSMUST00000117287 1073 ntBASIC8.99□□□□□ -0.97
Usf3B2RUQ2 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usf3B2RUQ2 Mir3060-201ENSMUST00000175339 83 ntBASIC8.99□□□□□ -0.97
Usf3B2RUQ2 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC8.99□□□□□ -0.97
Usf3B2RUQ2 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC8.99□□□□□ -0.97
Usf3B2RUQ2 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usf3B2RUQ2 Gm37365-201ENSMUST00000193109 409 ntBASIC8.99□□□□□ -0.97
Usf3B2RUQ2 Gm43506-201ENSMUST00000200675 753 ntBASIC8.99□□□□□ -0.97
Usf3B2RUQ2 Gm18035-201ENSMUST00000211962 589 ntBASIC8.99□□□□□ -0.97
Usf3B2RUQ2 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Usf3B2RUQ2 AC121357.1-201ENSMUST00000227365 608 ntBASIC8.99□□□□□ -0.97
Usf3B2RUQ2 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usf3B2RUQ2 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Gm43372-201ENSMUST00000202662 3016 ntBASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Sidt2-202ENSMUST00000114573 4012 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Gm13624-201ENSMUST00000120263 462 ntBASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Gm15196-201ENSMUST00000121406 482 ntBASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Usf3B2RUQ2 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Gm9487-201ENSMUST00000216600 472 ntBASIC8.98□□□□□ -0.97
Usf3B2RUQ2 AC154461.3-201ENSMUST00000224831 573 ntBASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Gm6564-201ENSMUST00000075377 619 ntBASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Gm38271-201ENSMUST00000192296 1603 ntBASIC8.98□□□□□ -0.97
Usf3B2RUQ2 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usf3B2RUQ2 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC8.98□□□□□ -0.97
Usf3B2RUQ2 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usf3B2RUQ2 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Gm17221-201ENSMUST00000163909 481 ntBASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Gm17073-201ENSMUST00000168069 556 ntBASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Gm9369-201ENSMUST00000196009 733 ntBASIC8.97□□□□□ -0.97
Usf3B2RUQ2 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Id2-203ENSMUST00000222667 958 ntBASIC8.97□□□□□ -0.97
Usf3B2RUQ2 AC138716.2-201ENSMUST00000226670 1016 ntBASIC8.97□□□□□ -0.97
Usf3B2RUQ2 AC122035.1-201ENSMUST00000227576 1016 ntBASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Gtf2i-223ENSMUST00000174513 4021 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Ctsa-201ENSMUST00000017904 3674 ntAPPRIS P4 TSL 5 BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 AC124577.2-201ENSMUST00000217413 2420 ntBASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Usf3B2RUQ2 Gm8752-201ENSMUST00000173427 1694 ntBASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms