Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Cdkl2-202ENSMUST00000086978 4066 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Gtf2i-223ENSMUST00000174513 4021 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Gm11573-201ENSMUST00000119956 394 ntBASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Gm26982-201ENSMUST00000182250 1151 ntBASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Gm31274-201ENSMUST00000197356 229 ntBASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 AC174797.2-202ENSMUST00000225729 568 ntBASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Gm37058-201ENSMUST00000193393 1644 ntBASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chmp2aQ9DB34 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Gm12570-201ENSMUST00000122047 1030 ntBASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Gm24248-201ENSMUST00000157321 322 ntBASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Gm20781-201ENSMUST00000193154 693 ntBASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Gm21736-201ENSMUST00000195399 693 ntBASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Gm6423-201ENSMUST00000204315 934 ntBASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Gm7536-201ENSMUST00000077389 444 ntBASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Ralgps1-201ENSMUST00000042615 6029 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms