Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Gm16570-201ENSMUST00000161951 436 ntBASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Gm9369-201ENSMUST00000196009 733 ntBASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Gm42657-201ENSMUST00000201746 211 ntBASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Gm42851-201ENSMUST00000201325 1411 ntBASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Sncaip-203ENSMUST00000163742 3272 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Gm26797-202ENSMUST00000213132 2562 ntTSL 5 BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Gm17391-201ENSMUST00000171036 126 ntBASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Gm43380-201ENSMUST00000200421 220 ntBASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Id2-203ENSMUST00000222667 958 ntBASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 AC154305.2-201ENSMUST00000225813 901 ntBASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Gm25125-201ENSMUST00000083340 136 ntBASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Snora73b-201ENSMUST00000083419 205 ntBASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Diaph1-201ENSMUST00000025337 5596 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Supt7l-205ENSMUST00000202421 3056 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Rab36-207ENSMUST00000147802 3291 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Zfp317-205ENSMUST00000215372 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Tnfaip8-212ENSMUST00000179937 2385 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Prkcd-208ENSMUST00000112211 2851 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp4cQ9D7F7 AC153370.2-201ENSMUST00000217920 3093 ntTSL 5 BASIC12.77□□□□□ -0.36
Chmp4cQ9D7F7 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Chmp4cQ9D7F7 AC154220.1-201ENSMUST00000225033 1705 ntBASIC12.77□□□□□ -0.36
Chmp4cQ9D7F7 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chmp4cQ9D7F7 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Chmp4cQ9D7F7 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Gm12389-201ENSMUST00000117696 418 ntBASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Gm12136-201ENSMUST00000120460 1209 ntBASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Gm43138-201ENSMUST00000199123 708 ntBASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 AC129975.1-201ENSMUST00000224816 592 ntBASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 CT025618.1-203ENSMUST00000227008 589 ntBASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp4cQ9D7F7 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms