Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Gm6641-201ENSMUST00000196100 1315 ntBASIC10.39□□□□□ -0.75
Otud1Q9CUB6 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Gm11619-201ENSMUST00000117474 237 ntBASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Gm14213-201ENSMUST00000119778 768 ntBASIC10.39□□□□□ -0.75
Otud1Q9CUB6 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC10.39□□□□□ -0.75
Otud1Q9CUB6 C030010L15Rik-201ENSMUST00000181465 715 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Mir8091-201ENSMUST00000183602 139 ntBASIC10.39□□□□□ -0.75
Otud1Q9CUB6 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Gm37452-201ENSMUST00000194416 1160 ntBASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Gm37973-201ENSMUST00000195767 1289 ntBASIC10.39□□□□□ -0.75
Otud1Q9CUB6 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Gm5298-201ENSMUST00000201122 892 ntBASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Gm17910-201ENSMUST00000211038 838 ntBASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Gm21064-201ENSMUST00000189723 1375 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Gm13022-201ENSMUST00000121181 285 ntBASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Gm14165-201ENSMUST00000121456 952 ntBASIC10.38□□□□□ -0.75
Otud1Q9CUB6 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Gm24809-201ENSMUST00000175318 271 ntBASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Gm42430-201ENSMUST00000197209 616 ntBASIC10.38□□□□□ -0.75
Otud1Q9CUB6 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Otud1Q9CUB6 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms