Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Gm25561-201ENSMUST00000104607 125 ntBASIC13.25□□□□□ -0.29
RtcbQ99LF4 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Gm29157-201ENSMUST00000188753 612 ntBASIC13.25□□□□□ -0.29
RtcbQ99LF4 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Gm44173-201ENSMUST00000204316 132 ntBASIC13.25□□□□□ -0.29
RtcbQ99LF4 Gm6426-201ENSMUST00000209048 854 ntBASIC13.25□□□□□ -0.29
RtcbQ99LF4 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
RtcbQ99LF4 AC102327.1-201ENSMUST00000226389 742 ntBASIC13.25□□□□□ -0.29
RtcbQ99LF4 AC123061.1-201ENSMUST00000228021 999 ntBASIC13.25□□□□□ -0.29
RtcbQ99LF4 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RtcbQ99LF4 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC13.25□□□□□ -0.29
RtcbQ99LF4 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Gm23129-201ENSMUST00000104259 132 ntBASIC13.24□□□□□ -0.29
RtcbQ99LF4 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Gm12047-201ENSMUST00000117561 944 ntBASIC13.24□□□□□ -0.29
RtcbQ99LF4 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC13.24□□□□□ -0.29
RtcbQ99LF4 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC13.24□□□□□ -0.29
RtcbQ99LF4 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC13.24□□□□□ -0.29
RtcbQ99LF4 Gm23999-201ENSMUST00000158057 104 ntBASIC13.24□□□□□ -0.29
RtcbQ99LF4 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Gm9513-201ENSMUST00000165591 306 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
RtcbQ99LF4 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Pcbd1-202ENSMUST00000218005 361 ntTSL 3 BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC13.24□□□□□ -0.29
RtcbQ99LF4 AC127583.1-201ENSMUST00000224351 540 ntBASIC13.24□□□□□ -0.29
RtcbQ99LF4 CT009550.1-201ENSMUST00000225750 864 ntBASIC13.24□□□□□ -0.29
RtcbQ99LF4 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
RtcbQ99LF4 AC116596.1-201ENSMUST00000228112 1762 ntBASIC13.24□□□□□ -0.29
RtcbQ99LF4 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RtcbQ99LF4 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RtcbQ99LF4 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC13.23□□□□□ -0.29
RtcbQ99LF4 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Gm13758-201ENSMUST00000118699 743 ntBASIC13.23□□□□□ -0.29
RtcbQ99LF4 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC13.23□□□□□ -0.29
RtcbQ99LF4 Gm13792-201ENSMUST00000121350 423 ntBASIC13.23□□□□□ -0.29
RtcbQ99LF4 Gm13191-201ENSMUST00000136489 416 ntTSL 3 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms