Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Gm14699-201ENSMUST00000122340 228 ntBASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Gm8525-201ENSMUST00000189674 861 ntBASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Gm29808-201ENSMUST00000194419 468 ntBASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Gm43117-201ENSMUST00000198531 379 ntBASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Gm43866-201ENSMUST00000203894 839 ntBASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Gm44388-201ENSMUST00000204350 258 ntBASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Gm7904-201ENSMUST00000217049 465 ntBASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Gm3791-201ENSMUST00000220790 768 ntBASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Gm29101-201ENSMUST00000188329 1471 ntBASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Smarcd2Q99JR8 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Smarcd2Q99JR8 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd2Q99JR8 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Smarcd2Q99JR8 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd2Q99JR8 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC10.84□□□□□ -0.67
Smarcd2Q99JR8 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd2Q99JR8 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd2Q99JR8 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd2Q99JR8 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd2Q99JR8 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd2Q99JR8 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd2Q99JR8 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd2Q99JR8 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd2Q99JR8 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd2Q99JR8 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd2Q99JR8 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Smarcd2Q99JR8 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd2Q99JR8 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd2Q99JR8 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd2Q99JR8 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd2Q99JR8 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd2Q99JR8 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd2Q99JR8 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd2Q99JR8 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd2Q99JR8 Gm12570-201ENSMUST00000122047 1030 ntBASIC10.84□□□□□ -0.67
Smarcd2Q99JR8 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC10.84□□□□□ -0.67
Smarcd2Q99JR8 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC10.84□□□□□ -0.67
Smarcd2Q99JR8 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC10.84□□□□□ -0.67
Smarcd2Q99JR8 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 278.4 ms