Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Crip1-201ENSMUST00000006523 445 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp54Q8BL06 Gm10250-201ENSMUST00000090488 482 ntBASIC14.98□□□□□ -0.01
Usp54Q8BL06 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC14.98□□□□□ -0.01
Usp54Q8BL06 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Usp54Q8BL06 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.98□□□□□ -0.01
Usp54Q8BL06 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Usp54Q8BL06 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC14.98□□□□□ -0.01
Usp54Q8BL06 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp54Q8BL06 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp54Q8BL06 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC14.98□□□□□ -0.01
Usp54Q8BL06 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Usp54Q8BL06 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Usp54Q8BL06 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp54Q8BL06 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC14.98□□□□□ -0.01
Usp54Q8BL06 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp54Q8BL06 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp54Q8BL06 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.98□□□□□ -0.01
Usp54Q8BL06 Spaca3-201ENSMUST00000103222 831 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp54Q8BL06 Hsd17b13-203ENSMUST00000120320 1118 ntTSL 5 BASIC14.98□□□□□ -0.01
Usp54Q8BL06 Gm13413-201ENSMUST00000120953 602 ntBASIC14.98□□□□□ -0.01
Usp54Q8BL06 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Usp54Q8BL06 2410141K09Rik-204ENSMUST00000173583 515 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Usp54Q8BL06 Gm20821-202ENSMUST00000180352 684 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Usp54Q8BL06 Gm6463-201ENSMUST00000182090 966 ntBASIC14.98□□□□□ -0.01
Usp54Q8BL06 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Usp54Q8BL06 1110025M09Rik-201ENSMUST00000192082 855 ntBASIC14.98□□□□□ -0.01
Usp54Q8BL06 Gm29803-201ENSMUST00000205069 375 ntBASIC14.98□□□□□ -0.01
Usp54Q8BL06 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC14.98□□□□□ -0.01
Usp54Q8BL06 AC124555.1-201ENSMUST00000227051 880 ntBASIC14.98□□□□□ -0.01
Usp54Q8BL06 3110009E18Rik-201ENSMUST00000027637 1007 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Usp54Q8BL06 Mgst2-201ENSMUST00000099106 603 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp54Q8BL06 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Usp54Q8BL06 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp54Q8BL06 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp54Q8BL06 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Usp54Q8BL06 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Gm15535-202ENSMUST00000148478 1519 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp54Q8BL06 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Gm11573-201ENSMUST00000119956 394 ntBASIC14.97□□□□□ -0.01
Usp54Q8BL06 Gm3752-202ENSMUST00000167833 450 ntTSL 5 BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Gm9075-201ENSMUST00000168738 794 ntBASIC14.97□□□□□ -0.01
Usp54Q8BL06 Gm10128-201ENSMUST00000171360 615 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Pkib-204ENSMUST00000175852 731 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Gm2956-202ENSMUST00000178722 450 ntTSL 5 BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Gm10340-202ENSMUST00000188235 615 ntTSL 5 BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Gm20186-203ENSMUST00000202542 741 ntTSL 3 BASIC14.97□□□□□ -0.01
Usp54Q8BL06 AC140426.1-201ENSMUST00000227933 459 ntBASIC14.97□□□□□ -0.01
Usp54Q8BL06 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Usp54Q8BL06 AC154575.1-201ENSMUST00000227166 1474 ntBASIC14.97□□□□□ -0.01
Usp54Q8BL06 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp54Q8BL06 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Usp54Q8BL06 AC125351.1-201ENSMUST00000221438 2223 ntBASIC14.96□□□□□ -0.01
Usp54Q8BL06 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp54Q8BL06 Gm11231-201ENSMUST00000117895 1706 ntBASIC14.96□□□□□ -0.01
Usp54Q8BL06 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp54Q8BL06 Cog5-201ENSMUST00000036862 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp54Q8BL06 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp54Q8BL06 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp54Q8BL06 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp54Q8BL06 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Usp54Q8BL06 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Usp54Q8BL06 Tmbim7-201ENSMUST00000014673 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp54Q8BL06 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Usp54Q8BL06 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp54Q8BL06 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp54Q8BL06 Gm8754-201ENSMUST00000118391 520 ntBASIC14.96□□□□□ -0.01
Usp54Q8BL06 Hnf1aos1-202ENSMUST00000129609 516 ntTSL 2 BASIC14.96□□□□□ -0.01
Usp54Q8BL06 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Usp54Q8BL06 Gm34780-201ENSMUST00000193896 949 ntBASIC14.96□□□□□ -0.01
Usp54Q8BL06 Opn1mw-201ENSMUST00000033771 1227 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp54Q8BL06 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp54Q8BL06 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp54Q8BL06 Cfap100-201ENSMUST00000062750 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp54Q8BL06 4930455D15Rik-201ENSMUST00000181632 1616 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Usp54Q8BL06 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp54Q8BL06 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp54Q8BL06 Gm7052-201ENSMUST00000167568 1512 ntBASIC14.96□□□□□ -0.01
Usp54Q8BL06 Gm5310-201ENSMUST00000197861 1511 ntBASIC14.96□□□□□ -0.01
Usp54Q8BL06 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms