Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Gm29101-201ENSMUST00000188329 1471 ntBASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Gm11411-201ENSMUST00000117951 719 ntBASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Gm16167-201ENSMUST00000160428 1065 ntBASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Gm25677-201ENSMUST00000174983 72 ntBASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Gm5543-201ENSMUST00000193329 1091 ntBASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Gm5870-201ENSMUST00000196461 282 ntBASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Gm45745-201ENSMUST00000211447 1180 ntBASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Gm45500-201ENSMUST00000211676 803 ntBASIC12.85□□□□□ -0.35
Vps54Q5SPW0 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Gm6478-201ENSMUST00000099450 742 ntBASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps54Q5SPW0 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm45719-201ENSMUST00000207954 1662 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm12397-201ENSMUST00000117674 615 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm15264-201ENSMUST00000118050 502 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm23400-201ENSMUST00000174994 102 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm26463-201ENSMUST00000175065 101 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm24332-201ENSMUST00000175102 102 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm25959-201ENSMUST00000175112 102 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm22475-201ENSMUST00000175169 102 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm22903-201ENSMUST00000175193 102 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm25070-201ENSMUST00000175237 102 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm24159-201ENSMUST00000175264 102 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm25299-201ENSMUST00000175283 102 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm23798-201ENSMUST00000175560 102 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm23802-201ENSMUST00000175565 102 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm25708-201ENSMUST00000177687 102 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm24370-201ENSMUST00000178007 102 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm23049-201ENSMUST00000178068 102 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm28019-201ENSMUST00000178138 101 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm25571-201ENSMUST00000178322 102 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm25355-201ENSMUST00000178456 101 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm24975-201ENSMUST00000178492 101 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm23189-201ENSMUST00000178954 102 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm25100-201ENSMUST00000179750 101 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm23064-201ENSMUST00000179866 101 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 AC155300.1-201ENSMUST00000219134 480 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.84□□□□□ -0.35
Vps54Q5SPW0 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC12.84□□□□□ -0.35
Vps54Q5SPW0 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms