Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Gm27438-201ENSMUST00000183480 110 ntBASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Gm43671-201ENSMUST00000200422 433 ntBASIC11.4□□□□□ -0.58
Syne3Q4FZC9 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Gm18042-201ENSMUST00000219887 790 ntBASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Gm37264-201ENSMUST00000194916 2192 ntBASIC11.4□□□□□ -0.59
Syne3Q4FZC9 Gm7742-201ENSMUST00000167648 1527 ntBASIC11.4□□□□□ -0.59
Syne3Q4FZC9 Gm7732-201ENSMUST00000170486 1527 ntBASIC11.4□□□□□ -0.59
Syne3Q4FZC9 Gm7740-201ENSMUST00000186171 1527 ntBASIC11.4□□□□□ -0.59
Syne3Q4FZC9 Gm7736-201ENSMUST00000096981 1527 ntBASIC11.4□□□□□ -0.59
Syne3Q4FZC9 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Syne3Q4FZC9 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Syne3Q4FZC9 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Syne3Q4FZC9 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Gm9673-201ENSMUST00000119287 781 ntBASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Gm4982-201ENSMUST00000160440 1098 ntBASIC11.39□□□□□ -0.59
Syne3Q4FZC9 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Gm23153-201ENSMUST00000175323 313 ntBASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.39□□□□□ -0.59
Syne3Q4FZC9 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.39□□□□□ -0.59
Syne3Q4FZC9 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Gm7600-201ENSMUST00000209657 785 ntBASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC11.39□□□□□ -0.59
Syne3Q4FZC9 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Gm43999-201ENSMUST00000204286 2889 ntBASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms