Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Gm35638-201ENSMUST00000220724 652 ntBASIC10.86□□□□□ -0.67
Usp30Q3UN04 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Usp30Q3UN04 AC101205.2-201ENSMUST00000226206 715 ntBASIC10.86□□□□□ -0.67
Usp30Q3UN04 AC106830.1-201ENSMUST00000228032 1003 ntBASIC10.86□□□□□ -0.67
Usp30Q3UN04 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usp30Q3UN04 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Usp30Q3UN04 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Usp30Q3UN04 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Usp30Q3UN04 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Usp30Q3UN04 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usp30Q3UN04 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Usp30Q3UN04 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usp30Q3UN04 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usp30Q3UN04 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usp30Q3UN04 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC10.86□□□□□ -0.67
Usp30Q3UN04 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usp30Q3UN04 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usp30Q3UN04 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Usp30Q3UN04 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Usp30Q3UN04 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usp30Q3UN04 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usp30Q3UN04 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usp30Q3UN04 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Gm24933-201ENSMUST00000103762 110 ntBASIC10.85□□□□□ -0.67
Usp30Q3UN04 Gm23252-201ENSMUST00000103776 110 ntBASIC10.85□□□□□ -0.67
Usp30Q3UN04 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Gm12439-201ENSMUST00000117162 365 ntBASIC10.85□□□□□ -0.67
Usp30Q3UN04 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC10.85□□□□□ -0.67
Usp30Q3UN04 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Gm13857-201ENSMUST00000139645 173 ntBASIC10.85□□□□□ -0.67
Usp30Q3UN04 Gm26368-201ENSMUST00000157826 118 ntBASIC10.85□□□□□ -0.67
Usp30Q3UN04 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Gm6612-201ENSMUST00000170777 395 ntBASIC10.85□□□□□ -0.67
Usp30Q3UN04 Gm24954-201ENSMUST00000178831 110 ntBASIC10.85□□□□□ -0.67
Usp30Q3UN04 Gm26443-201ENSMUST00000179610 110 ntBASIC10.85□□□□□ -0.67
Usp30Q3UN04 Gm7069-201ENSMUST00000182418 1008 ntBASIC10.85□□□□□ -0.67
Usp30Q3UN04 Gm5274-201ENSMUST00000182641 1003 ntBASIC10.85□□□□□ -0.67
Usp30Q3UN04 Gm29543-201ENSMUST00000188138 967 ntBASIC10.85□□□□□ -0.67
Usp30Q3UN04 Gm37860-201ENSMUST00000195380 1034 ntBASIC10.85□□□□□ -0.67
Usp30Q3UN04 Gm38349-201ENSMUST00000195732 462 ntBASIC10.85□□□□□ -0.67
Usp30Q3UN04 Gm8234-201ENSMUST00000198523 1107 ntBASIC10.85□□□□□ -0.67
Usp30Q3UN04 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 AC155300.1-201ENSMUST00000219134 480 ntBASIC10.85□□□□□ -0.67
Usp30Q3UN04 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.85□□□□□ -0.67
Usp30Q3UN04 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp30Q3UN04 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Usp30Q3UN04 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usp30Q3UN04 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Usp30Q3UN04 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usp30Q3UN04 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Usp30Q3UN04 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usp30Q3UN04 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usp30Q3UN04 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.84□□□□□ -0.67
Usp30Q3UN04 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.84□□□□□ -0.67
Usp30Q3UN04 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usp30Q3UN04 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Usp30Q3UN04 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usp30Q3UN04 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Usp30Q3UN04 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms