Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm45808-201ENSMUST00000210701 789 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Bpifa5-201ENSMUST00000028986 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Adh1-201ENSMUST00000004232 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Tmem254c-201ENSMUST00000100818 1066 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Fhl1-206ENSMUST00000116596 1203 ntTSL 5 BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Gm12796-201ENSMUST00000131864 344 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Gm28032-201ENSMUST00000184104 96 ntBASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Gm38004-201ENSMUST00000192972 357 ntBASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Gm42617-201ENSMUST00000197640 1229 ntBASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Rce1-203ENSMUST00000224707 1255 ntBASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Olfr1329-201ENSMUST00000071979 942 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 AC123738.2-201ENSMUST00000223791 1899 ntBASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Gm13135-201ENSMUST00000117628 3121 ntBASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b2Q3UJB0 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Sf3b2Q3UJB0 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Pabpc5-202ENSMUST00000113366 2243 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Gm23908-201ENSMUST00000104599 132 ntBASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Gm14676-201ENSMUST00000117722 858 ntBASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Gm15539-201ENSMUST00000118452 566 ntBASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Pde7a-203ENSMUST00000121951 382 ntTSL 3 BASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Gm12362-201ENSMUST00000121986 342 ntBASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 D430040D24Rik-201ENSMUST00000149224 910 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Gm3687-201ENSMUST00000161710 460 ntBASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 1010001N08Rik-202ENSMUST00000181316 728 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Gm5205-201ENSMUST00000182253 1003 ntBASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 4933436E23Rik-201ENSMUST00000192824 1111 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Lysmd4-203ENSMUST00000207757 631 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Zkscan7-205ENSMUST00000216462 990 ntBASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 n-R5s25-201ENSMUST00000082923 119 ntBASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 AC147366.2-201ENSMUST00000226859 2038 ntBASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Sf3b2Q3UJB0 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms