Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Gm13777-201ENSMUST00000118208 345 ntBASIC13.47□□□□□ -0.25
Nkx2-3P97334 Gm12420-201ENSMUST00000119869 1048 ntBASIC13.47□□□□□ -0.25
Nkx2-3P97334 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Gm26875-201ENSMUST00000181006 950 ntBASIC13.47□□□□□ -0.25
Nkx2-3P97334 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Gm37390-201ENSMUST00000192452 872 ntBASIC13.47□□□□□ -0.25
Nkx2-3P97334 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Gm17936-201ENSMUST00000199413 988 ntBASIC13.47□□□□□ -0.25
Nkx2-3P97334 Gm18164-201ENSMUST00000213769 927 ntBASIC13.47□□□□□ -0.25
Nkx2-3P97334 Gm18166-201ENSMUST00000215557 927 ntBASIC13.47□□□□□ -0.25
Nkx2-3P97334 AC172027.1-201ENSMUST00000217659 337 ntBASIC13.47□□□□□ -0.25
Nkx2-3P97334 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-3P97334 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC13.47□□□□□ -0.25
Nkx2-3P97334 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC13.47□□□□□ -0.25
Nkx2-3P97334 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC13.47□□□□□ -0.25
Nkx2-3P97334 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Gm42974-201ENSMUST00000199556 2654 ntBASIC13.47□□□□□ -0.25
Nkx2-3P97334 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Gm42587-201ENSMUST00000198462 1981 ntBASIC13.47□□□□□ -0.25
Nkx2-3P97334 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Nkx2-3P97334 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-3P97334 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-3P97334 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC13.46□□□□□ -0.25
Nkx2-3P97334 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-3P97334 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-3P97334 AC130671.3-201ENSMUST00000227393 1897 ntBASIC13.46□□□□□ -0.25
Nkx2-3P97334 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-3P97334 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC13.46□□□□□ -0.25
Nkx2-3P97334 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-3P97334 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-3P97334 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC13.46□□□□□ -0.25
Nkx2-3P97334 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-3P97334 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-3P97334 Gm36940-201ENSMUST00000194281 2036 ntBASIC13.46□□□□□ -0.25
Nkx2-3P97334 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-3P97334 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Nkx2-3P97334 Gm43963-201ENSMUST00000203466 2488 ntBASIC13.46□□□□□ -0.25
Nkx2-3P97334 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-3P97334 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Nkx2-3P97334 Gm24470-201ENSMUST00000104486 132 ntBASIC13.46□□□□□ -0.25
Nkx2-3P97334 Gm12377-201ENSMUST00000118656 252 ntBASIC13.46□□□□□ -0.25
Nkx2-3P97334 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC13.46□□□□□ -0.25
Nkx2-3P97334 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-3P97334 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC13.46□□□□□ -0.25
Nkx2-3P97334 1700001J04Rik-202ENSMUST00000154037 743 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-3P97334 Gm23999-201ENSMUST00000158057 104 ntBASIC13.46□□□□□ -0.25
Nkx2-3P97334 Gm5766-202ENSMUST00000161633 799 ntBASIC13.46□□□□□ -0.25
Nkx2-3P97334 Gm21963-201ENSMUST00000179519 330 ntBASIC13.46□□□□□ -0.25
Nkx2-3P97334 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC13.46□□□□□ -0.25
Nkx2-3P97334 Gm29487-201ENSMUST00000190146 256 ntBASIC13.46□□□□□ -0.25
Nkx2-3P97334 Gm29808-201ENSMUST00000194419 468 ntBASIC13.46□□□□□ -0.25
Nkx2-3P97334 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC13.46□□□□□ -0.25
Nkx2-3P97334 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC13.46□□□□□ -0.25
Nkx2-3P97334 Gm43997-201ENSMUST00000203986 1005 ntBASIC13.46□□□□□ -0.25
Nkx2-3P97334 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Nkx2-3P97334 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC13.46□□□□□ -0.25
Nkx2-3P97334 AC242269.1-201ENSMUST00000227020 741 ntBASIC13.46□□□□□ -0.25
Nkx2-3P97334 Myl10-201ENSMUST00000005611 688 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-3P97334 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Nkx2-3P97334 Gm8730-201ENSMUST00000076373 954 ntBASIC13.46□□□□□ -0.25
Nkx2-3P97334 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-3P97334 AC154220.1-201ENSMUST00000225033 1705 ntBASIC13.46□□□□□ -0.25
Nkx2-3P97334 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx2-3P97334 Gm12097-201ENSMUST00000121523 1414 ntBASIC13.46□□□□□ -0.26
Nkx2-3P97334 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx2-3P97334 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC13.46□□□□□ -0.26
Nkx2-3P97334 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx2-3P97334 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms