Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Nup43P59235 Gm37697-201ENSMUST00000195680 1844 ntBASIC10.17□□□□□ -0.78
Nup43P59235 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 AC153524.2-202ENSMUST00000220401 1794 ntBASIC10.16□□□□□ -0.78
Nup43P59235 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Nup43P59235 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.16□□□□□ -0.78
Nup43P59235 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.16□□□□□ -0.78
Nup43P59235 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Nup43P59235 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC10.16□□□□□ -0.78
Nup43P59235 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.16□□□□□ -0.78
Nup43P59235 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Nup43P59235 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Nup43P59235 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Gm15264-201ENSMUST00000118050 502 ntBASIC10.16□□□□□ -0.78
Nup43P59235 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Gm6425-201ENSMUST00000136332 790 ntBASIC10.16□□□□□ -0.78
Nup43P59235 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC10.16□□□□□ -0.78
Nup43P59235 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC10.16□□□□□ -0.78
Nup43P59235 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Nup43P59235 Gm9372-201ENSMUST00000168454 430 ntBASIC10.16□□□□□ -0.78
Nup43P59235 Gm19587-201ENSMUST00000191395 545 ntBASIC10.16□□□□□ -0.78
Nup43P59235 Gm31274-201ENSMUST00000197356 229 ntBASIC10.16□□□□□ -0.78
Nup43P59235 Gm5298-201ENSMUST00000201122 892 ntBASIC10.16□□□□□ -0.78
Nup43P59235 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC10.16□□□□□ -0.78
Nup43P59235 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Gm8181-201ENSMUST00000062242 669 ntBASIC10.16□□□□□ -0.78
Nup43P59235 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC10.16□□□□□ -0.78
Nup43P59235 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Nup43P59235 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Nup43P59235 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Nup43P59235 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.16□□□□□ -0.78
Nup43P59235 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC10.16□□□□□ -0.78
Nup43P59235 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC10.16□□□□□ -0.78
Nup43P59235 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.16□□□□□ -0.78
Nup43P59235 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Nup43P59235 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Nup43P59235 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.16□□□□□ -0.78
Nup43P59235 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Nup43P59235 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup43P59235 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC10.16□□□□□ -0.78
Nup43P59235 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC10.16□□□□□ -0.78
Nup43P59235 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.16□□□□□ -0.78
Nup43P59235 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nup43P59235 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nup43P59235 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nup43P59235 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nup43P59235 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nup43P59235 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nup43P59235 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nup43P59235 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.15□□□□□ -0.78
Nup43P59235 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nup43P59235 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Nup43P59235 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nup43P59235 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nup43P59235 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Nup43P59235 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nup43P59235 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Nup43P59235 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nup43P59235 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nup43P59235 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Nup43P59235 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nup43P59235 AA474408-201ENSMUST00000098110 3339 ntBASIC10.15□□□□□ -0.78
Nup43P59235 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Nup43P59235 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms