Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
Sox1P53783 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.04□□□□□ -0.64
Sox1P53783 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 Stard3nl-205ENSMUST00000197565 1391 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Sox1P53783 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.04□□□□□ -0.64
Sox1P53783 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.04□□□□□ -0.64
Sox1P53783 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.04□□□□□ -0.64
Sox1P53783 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 Hspa12b-202ENSMUST00000100763 628 ntTSL 2 BASIC11.04□□□□□ -0.64
Sox1P53783 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 Apoo-201ENSMUST00000113895 1173 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 Il24-201ENSMUST00000121040 1159 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 Pde7a-203ENSMUST00000121951 382 ntTSL 3 BASIC11.04□□□□□ -0.64
Sox1P53783 Eif4a-ps4-201ENSMUST00000122226 1218 ntBASIC11.04□□□□□ -0.64
Sox1P53783 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 Gm11608-202ENSMUST00000153049 877 ntTSL 3 BASIC11.04□□□□□ -0.64
Sox1P53783 Gm15587-202ENSMUST00000156403 709 ntTSL 5 BASIC11.04□□□□□ -0.64
Sox1P53783 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 Gm24180-201ENSMUST00000179961 110 ntBASIC11.04□□□□□ -0.64
Sox1P53783 Pea15b-202ENSMUST00000183185 555 ntBASIC11.04□□□□□ -0.64
Sox1P53783 Gm3052-201ENSMUST00000186409 829 ntBASIC11.04□□□□□ -0.64
Sox1P53783 Gm19798-201ENSMUST00000201502 457 ntBASIC11.04□□□□□ -0.64
Sox1P53783 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC11.04□□□□□ -0.64
Sox1P53783 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC11.04□□□□□ -0.64
Sox1P53783 Gm2721-202ENSMUST00000222652 459 ntTSL 5 BASIC11.04□□□□□ -0.64
Sox1P53783 Cxcl3-201ENSMUST00000031326 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 Gm4953-201ENSMUST00000077309 483 ntBASIC11.04□□□□□ -0.64
Sox1P53783 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Sox1P53783 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sox1P53783 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 Serpina5-201ENSMUST00000021495 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 AC147366.2-201ENSMUST00000226859 2038 ntBASIC11.04□□□□□ -0.64
Sox1P53783 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sox1P53783 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.04□□□□□ -0.64
Sox1P53783 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox1P53783 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 AC124561.1-202ENSMUST00000228652 1929 ntBASIC11.03□□□□□ -0.64
Sox1P53783 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Sox1P53783 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.03□□□□□ -0.64
Sox1P53783 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.03□□□□□ -0.64
Sox1P53783 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Sox1P53783 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Sox1P53783 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Sox1P53783 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Sox1P53783 Gm6141-201ENSMUST00000117181 695 ntBASIC11.03□□□□□ -0.64
Sox1P53783 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC11.03□□□□□ -0.64
Sox1P53783 Gm24597-201ENSMUST00000122503 300 ntBASIC11.03□□□□□ -0.64
Sox1P53783 Gm25319-201ENSMUST00000122552 325 ntBASIC11.03□□□□□ -0.64
Sox1P53783 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC11.03□□□□□ -0.64
Sox1P53783 Bcas1os2-201ENSMUST00000131931 1174 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Elof1-201ENSMUST00000013966 888 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Gm12415-201ENSMUST00000141637 512 ntTSL 3 BASIC11.03□□□□□ -0.64
Sox1P53783 Gm4473-201ENSMUST00000145987 657 ntTSL 2 BASIC11.03□□□□□ -0.64
Sox1P53783 Gm9513-201ENSMUST00000165591 306 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Scgb1b21-201ENSMUST00000170232 268 ntBASIC11.03□□□□□ -0.64
Sox1P53783 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Crip1-205ENSMUST00000199089 509 ntTSL 3 BASIC11.03□□□□□ -0.64
Sox1P53783 Gm45696-201ENSMUST00000212088 985 ntBASIC11.03□□□□□ -0.64
Sox1P53783 Gm3889-201ENSMUST00000212467 612 ntBASIC11.03□□□□□ -0.64
Sox1P53783 AC118476.4-201ENSMUST00000215385 790 ntTSL 5 BASIC11.03□□□□□ -0.64
Sox1P53783 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC11.03□□□□□ -0.64
Sox1P53783 AC156274.1-201ENSMUST00000219193 634 ntBASIC11.03□□□□□ -0.64
Sox1P53783 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC11.03□□□□□ -0.64
Sox1P53783 Gm18119-201ENSMUST00000219972 616 ntBASIC11.03□□□□□ -0.64
Sox1P53783 Gm18749-201ENSMUST00000222410 692 ntBASIC11.03□□□□□ -0.64
Sox1P53783 AC129590.1-201ENSMUST00000225573 852 ntBASIC11.03□□□□□ -0.64
Sox1P53783 Gm7190-201ENSMUST00000118669 1452 ntBASIC11.03□□□□□ -0.64
Sox1P53783 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms