Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 AC161877.1-201ENSMUST00000227736 699 ntBASIC11.05□□□□□ -0.64
Cxcl12P40224 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcl12P40224 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcl12P40224 Olfr578-201ENSMUST00000056235 942 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Cxcl12P40224 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcl12P40224 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcl12P40224 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcl12P40224 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcl12P40224 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcl12P40224 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcl12P40224 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.05□□□□□ -0.64
Cxcl12P40224 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.04□□□□□ -0.64
Cxcl12P40224 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cxcl12P40224 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cxcl12P40224 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cxcl12P40224 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 Ccl6-201ENSMUST00000019071 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Cxcl12P40224 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Cxcl12P40224 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 Gm14153-201ENSMUST00000119923 1139 ntBASIC11.04□□□□□ -0.64
Cxcl12P40224 Apela-201ENSMUST00000124790 945 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Cxcl12P40224 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 Gm24074-201ENSMUST00000158178 260 ntBASIC11.04□□□□□ -0.64
Cxcl12P40224 Gm3687-201ENSMUST00000161710 460 ntBASIC11.04□□□□□ -0.64
Cxcl12P40224 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 Gm17171-201ENSMUST00000168048 534 ntTSL 3 BASIC11.04□□□□□ -0.64
Cxcl12P40224 Gm3052-201ENSMUST00000186409 829 ntBASIC11.04□□□□□ -0.64
Cxcl12P40224 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC11.04□□□□□ -0.64
Cxcl12P40224 Gm19058-201ENSMUST00000192135 598 ntBASIC11.04□□□□□ -0.64
Cxcl12P40224 Gm42875-201ENSMUST00000197674 1015 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 Gm5302-201ENSMUST00000202130 796 ntBASIC11.04□□□□□ -0.64
Cxcl12P40224 Gm18122-201ENSMUST00000211390 904 ntBASIC11.04□□□□□ -0.64
Cxcl12P40224 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC11.04□□□□□ -0.64
Cxcl12P40224 Gm7727-201ENSMUST00000219830 671 ntBASIC11.04□□□□□ -0.64
Cxcl12P40224 n-R5s25-201ENSMUST00000082923 119 ntBASIC11.04□□□□□ -0.64
Cxcl12P40224 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cxcl12P40224 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Cxcl12P40224 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.04□□□□□ -0.64
Cxcl12P40224 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 AC132833.1-202ENSMUST00000228875 1690 ntBASIC11.04□□□□□ -0.64
Cxcl12P40224 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC11.04□□□□□ -0.64
Cxcl12P40224 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.04□□□□□ -0.64
Cxcl12P40224 Gm11231-201ENSMUST00000117895 1706 ntBASIC11.04□□□□□ -0.64
Cxcl12P40224 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl12P40224 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.03□□□□□ -0.64
Cxcl12P40224 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.03□□□□□ -0.64
Cxcl12P40224 H2-M10.4-201ENSMUST00000057502 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl12P40224 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl12P40224 3110001I22Rik-201ENSMUST00000035426 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl12P40224 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl12P40224 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl12P40224 Igsf5-204ENSMUST00000113795 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl12P40224 Gm16518-201ENSMUST00000117960 508 ntBASIC11.03□□□□□ -0.64
Cxcl12P40224 Gm12011-201ENSMUST00000119734 618 ntBASIC11.03□□□□□ -0.64
Cxcl12P40224 Gm13792-201ENSMUST00000121350 423 ntBASIC11.03□□□□□ -0.64
Cxcl12P40224 6330418K02Rik-202ENSMUST00000125662 1267 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl12P40224 Wdr17-204ENSMUST00000129132 1043 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl12P40224 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl12P40224 Gm4398-201ENSMUST00000182698 992 ntBASIC11.03□□□□□ -0.64
Cxcl12P40224 Gm38135-201ENSMUST00000195068 502 ntBASIC11.03□□□□□ -0.64
Cxcl12P40224 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC11.03□□□□□ -0.64
Cxcl12P40224 Gm30301-201ENSMUST00000199474 652 ntTSL 5 BASIC11.03□□□□□ -0.64
Cxcl12P40224 Gm45846-201ENSMUST00000211170 446 ntTSL 2 BASIC11.03□□□□□ -0.64
Cxcl12P40224 4930547H16Rik-201ENSMUST00000222281 907 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl12P40224 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC11.03□□□□□ -0.64
Cxcl12P40224 AC134860.5-201ENSMUST00000225071 1249 ntBASIC11.03□□□□□ -0.64
Cxcl12P40224 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl12P40224 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Cxcl12P40224 Uros-204ENSMUST00000106146 1483 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cxcl12P40224 H2-DMb2-202ENSMUST00000171231 1483 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl12P40224 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl12P40224 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl12P40224 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl12P40224 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cxcl12P40224 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl12P40224 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl12P40224 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl12P40224 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms