Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Hoxd8P23463 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxd8P23463 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Hoxd8P23463 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxd8P23463 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC11.24□□□□□ -0.61
Hoxd8P23463 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC11.24□□□□□ -0.61
Hoxd8P23463 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxd8P23463 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.24□□□□□ -0.61
Hoxd8P23463 Gm27675-201ENSMUST00000184527 94 ntBASIC11.24□□□□□ -0.61
Hoxd8P23463 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC11.24□□□□□ -0.61
Hoxd8P23463 Gm18182-201ENSMUST00000191380 1251 ntBASIC11.24□□□□□ -0.61
Hoxd8P23463 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC11.24□□□□□ -0.61
Hoxd8P23463 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC11.24□□□□□ -0.61
Hoxd8P23463 Gm42464-201ENSMUST00000196717 417 ntBASIC11.24□□□□□ -0.61
Hoxd8P23463 Gm18256-201ENSMUST00000209087 907 ntBASIC11.24□□□□□ -0.61
Hoxd8P23463 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxd8P23463 Gm8796-201ENSMUST00000219122 936 ntBASIC11.24□□□□□ -0.61
Hoxd8P23463 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxd8P23463 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxd8P23463 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Hoxd8P23463 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxd8P23463 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxd8P23463 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxd8P23463 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxd8P23463 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.24□□□□□ -0.61
Hoxd8P23463 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxd8P23463 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Hoxd8P23463 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxd8P23463 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Hoxd8P23463 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxd8P23463 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC11.24□□□□□ -0.61
Hoxd8P23463 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxd8P23463 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxd8P23463 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Hoxd8P23463 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxd8P23463 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Hoxd8P23463 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxd8P23463 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxd8P23463 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC11.24□□□□□ -0.61
Hoxd8P23463 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Hoxd8P23463 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Hoxd8P23463 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Hoxd8P23463 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 Gm13171-201ENSMUST00000117233 391 ntBASIC11.23□□□□□ -0.61
Hoxd8P23463 Gm15707-201ENSMUST00000118804 996 ntBASIC11.23□□□□□ -0.61
Hoxd8P23463 Gm14938-201ENSMUST00000119482 943 ntBASIC11.23□□□□□ -0.61
Hoxd8P23463 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC11.23□□□□□ -0.61
Hoxd8P23463 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC11.23□□□□□ -0.61
Hoxd8P23463 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC11.23□□□□□ -0.61
Hoxd8P23463 Gm5543-201ENSMUST00000193329 1091 ntBASIC11.23□□□□□ -0.61
Hoxd8P23463 Gm2345-201ENSMUST00000193451 589 ntBASIC11.23□□□□□ -0.61
Hoxd8P23463 Gm2474-201ENSMUST00000195162 559 ntBASIC11.23□□□□□ -0.61
Hoxd8P23463 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC11.23□□□□□ -0.61
Hoxd8P23463 Gm43811-201ENSMUST00000202862 695 ntBASIC11.23□□□□□ -0.61
Hoxd8P23463 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 AC241616.1-201ENSMUST00000213741 166 ntBASIC11.23□□□□□ -0.61
Hoxd8P23463 AC118750.1-201ENSMUST00000214163 675 ntTSL 3 BASIC11.23□□□□□ -0.61
Hoxd8P23463 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Hoxd8P23463 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Hoxd8P23463 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Hoxd8P23463 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 Rps3a3-201ENSMUST00000074680 795 ntBASIC11.23□□□□□ -0.61
Hoxd8P23463 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 AC154354.1-203ENSMUST00000225565 1364 ntBASIC11.23□□□□□ -0.61
Hoxd8P23463 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Hoxd8P23463 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC11.23□□□□□ -0.61
Hoxd8P23463 Gm3372-201ENSMUST00000198806 1792 ntBASIC11.23□□□□□ -0.61
Hoxd8P23463 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxd8P23463 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxd8P23463 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxd8P23463 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxd8P23463 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxd8P23463 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 366.8 ms