Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P20040 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P20040 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
P20040 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC9.53□□□□□ -0.88
P20040 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P20040 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
P20040 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC9.53□□□□□ -0.88
P20040 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P20040 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC9.53□□□□□ -0.88
P20040 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
P20040 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
P20040 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC9.53□□□□□ -0.88
P20040 Gm12218-201ENSMUST00000117666 399 ntBASIC9.53□□□□□ -0.88
P20040 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
P20040 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC9.53□□□□□ -0.88
P20040 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
P20040 Gm24992-201ENSMUST00000157412 130 ntBASIC9.53□□□□□ -0.88
P20040 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P20040 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC9.53□□□□□ -0.88
P20040 Gm26134-201ENSMUST00000178484 110 ntBASIC9.53□□□□□ -0.88
P20040 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
P20040 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC9.53□□□□□ -0.88
P20040 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC9.53□□□□□ -0.88
P20040 Mt1-202ENSMUST00000211807 1085 ntBASIC9.53□□□□□ -0.88
P20040 AC114645.1-201ENSMUST00000215831 187 ntBASIC9.53□□□□□ -0.88
P20040 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC9.53□□□□□ -0.88
P20040 CT009527.1-201ENSMUST00000224205 339 ntBASIC9.53□□□□□ -0.88
P20040 Prrxl1-205ENSMUST00000228878 723 ntBASIC9.53□□□□□ -0.88
P20040 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC9.53□□□□□ -0.88
P20040 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
P20040 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P20040 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P20040 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P20040 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P20040 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
P20040 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
P20040 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
P20040 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P20040 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
P20040 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P20040 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
P20040 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P20040 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
P20040 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P20040 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC9.53□□□□□ -0.88
P20040 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
P20040 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC9.53□□□□□ -0.88
P20040 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC9.52□□□□□ -0.88
P20040 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
P20040 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.88
P20040 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
P20040 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC9.52□□□□□ -0.88
P20040 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
P20040 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
P20040 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
P20040 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.89
P20040 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
P20040 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
P20040 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
P20040 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
P20040 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
P20040 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC9.52□□□□□ -0.89
P20040 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
P20040 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
P20040 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
P20040 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
P20040 Gm12274-201ENSMUST00000120062 385 ntBASIC9.52□□□□□ -0.89
P20040 Gm12899-201ENSMUST00000120565 551 ntBASIC9.52□□□□□ -0.89
P20040 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC9.52□□□□□ -0.89
P20040 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
P20040 Mir1956-201ENSMUST00000157748 65 ntBASIC9.52□□□□□ -0.89
P20040 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
P20040 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
P20040 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC9.52□□□□□ -0.89
P20040 Mir6998-201ENSMUST00000183343 64 ntBASIC9.52□□□□□ -0.89
P20040 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC9.52□□□□□ -0.89
P20040 Gm28388-201ENSMUST00000186262 437 ntBASIC9.52□□□□□ -0.89
P20040 Gm34023-201ENSMUST00000195539 217 ntBASIC9.52□□□□□ -0.89
P20040 Gm43143-201ENSMUST00000196083 2023 ntBASIC9.52□□□□□ -0.89
P20040 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
P20040 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC9.52□□□□□ -0.89
P20040 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC9.52□□□□□ -0.89
P20040 Gm18561-201ENSMUST00000206027 804 ntBASIC9.52□□□□□ -0.89
P20040 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC9.52□□□□□ -0.89
P20040 Gm8436-201ENSMUST00000210152 1080 ntBASIC9.52□□□□□ -0.89
P20040 Gm5749-201ENSMUST00000210673 1090 ntBASIC9.52□□□□□ -0.89
P20040 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC9.52□□□□□ -0.89
P20040 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC9.52□□□□□ -0.89
P20040 Gm19009-201ENSMUST00000223072 823 ntBASIC9.52□□□□□ -0.89
P20040 CT009536.2-201ENSMUST00000225370 665 ntBASIC9.52□□□□□ -0.89
P20040 AC165154.1-201ENSMUST00000226661 340 ntBASIC9.52□□□□□ -0.89
P20040 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
P20040 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
P20040 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
P20040 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
P20040 Gm44888-201ENSMUST00000209119 2541 ntBASIC9.52□□□□□ -0.89
P20040 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
P20040 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
P20040 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
P20040 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms