Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Hoxd3P09027 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hoxd3P09027 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC8.74□□□□□ -1.01
Hoxd3P09027 AC158636.1-201ENSMUST00000220118 1393 ntBASIC8.74□□□□□ -1.01
Hoxd3P09027 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC8.74□□□□□ -1.01
Hoxd3P09027 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Nudt13-207ENSMUST00000224311 1574 ntBASIC8.74□□□□□ -1.01
Hoxd3P09027 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Hoxd3P09027 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC8.74□□□□□ -1.01
Hoxd3P09027 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Hoxd3P09027 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Hoxd3P09027 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC8.74□□□□□ -1.01
Hoxd3P09027 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Hoxd3P09027 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC8.74□□□□□ -1.01
Hoxd3P09027 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC8.74□□□□□ -1.01
Hoxd3P09027 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm15374-201ENSMUST00000119313 844 ntBASIC8.74□□□□□ -1.01
Hoxd3P09027 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm13117-201ENSMUST00000120894 691 ntBASIC8.74□□□□□ -1.01
Hoxd3P09027 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm16129-201ENSMUST00000152628 486 ntBASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm15744-201ENSMUST00000161734 213 ntBASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Hoxd3P09027 Olfml3-204ENSMUST00000169286 874 ntBASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Hoxd3P09027 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC8.74□□□□□ -1.01
Hoxd3P09027 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm17709-201ENSMUST00000174536 1096 ntBASIC8.74□□□□□ -1.01
Hoxd3P09027 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm6407-201ENSMUST00000176468 549 ntBASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm21778-201ENSMUST00000178779 471 ntBASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm29164-201ENSMUST00000185454 1024 ntBASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm29161-201ENSMUST00000188250 699 ntBASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC8.74□□□□□ -1.01
Hoxd3P09027 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm37934-201ENSMUST00000192902 402 ntBASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm42816-201ENSMUST00000198433 325 ntBASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm18748-201ENSMUST00000198507 622 ntBASIC8.74□□□□□ -1.01
Hoxd3P09027 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm42733-201ENSMUST00000201272 519 ntBASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC8.74□□□□□ -1.01
Hoxd3P09027 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm3017-201ENSMUST00000203603 1126 ntBASIC8.74□□□□□ -1.01
Hoxd3P09027 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm8436-201ENSMUST00000210152 1080 ntBASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm5749-201ENSMUST00000210673 1090 ntBASIC8.74□□□□□ -1.01
Hoxd3P09027 Mt1-202ENSMUST00000211807 1085 ntBASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm45758-201ENSMUST00000212448 1006 ntBASIC8.74□□□□□ -1.01
Hoxd3P09027 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC8.74□□□□□ -1.01
Hoxd3P09027 AC164612.2-201ENSMUST00000215737 719 ntTSL 5 BASIC8.74□□□□□ -1.01
Hoxd3P09027 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC8.74□□□□□ -1.01
Hoxd3P09027 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 AC192616.3-201ENSMUST00000220797 1124 ntBASIC8.74□□□□□ -1.01
Hoxd3P09027 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Hoxd3P09027 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
Hoxd3P09027 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC8.74□□□□□ -1.01
Hoxd3P09027 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Hoxd3P09027 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Hoxd3P09027 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Hoxd3P09027 Bcl2-202ENSMUST00000189999 2841 ntBASIC8.74□□□□□ -1.01
Hoxd3P09027 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Hoxd3P09027 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 336.1 ms