Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
P04224 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC9.39□□□□□ -0.91
P04224 Gm13916-201ENSMUST00000117368 628 ntBASIC9.39□□□□□ -0.91
P04224 Gm12196-201ENSMUST00000120954 262 ntBASIC9.39□□□□□ -0.91
P04224 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC9.39□□□□□ -0.91
P04224 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Gm22846-201ENSMUST00000157706 270 ntBASIC9.39□□□□□ -0.91
P04224 Gm25226-201ENSMUST00000158198 123 ntBASIC9.39□□□□□ -0.91
P04224 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Gm8459-201ENSMUST00000162504 760 ntBASIC9.39□□□□□ -0.91
P04224 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC9.39□□□□□ -0.91
P04224 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC9.39□□□□□ -0.91
P04224 Gm27530-201ENSMUST00000184096 98 ntBASIC9.39□□□□□ -0.91
P04224 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Gm2965-201ENSMUST00000198365 343 ntBASIC9.39□□□□□ -0.91
P04224 Gm7783-201ENSMUST00000204795 781 ntBASIC9.39□□□□□ -0.91
P04224 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC9.39□□□□□ -0.91
P04224 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC9.39□□□□□ -0.91
P04224 Gm6867-201ENSMUST00000219165 425 ntBASIC9.39□□□□□ -0.91
P04224 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Pik3c3-201ENSMUST00000091978 2998 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
P04224 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Mettl14-202ENSMUST00000090371 7197 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Ptk2b-202ENSMUST00000089250 3903 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Gin1-203ENSMUST00000112844 2046 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC9.39□□□□□ -0.91
P04224 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Prdm1-204ENSMUST00000218369 2517 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
P04224 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Rho-201ENSMUST00000032471 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Shc4-201ENSMUST00000042246 4059 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Cog5-201ENSMUST00000036862 2997 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Il1rap-201ENSMUST00000023156 4520 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Phf21a-204ENSMUST00000111290 6332 ntTSL 5 BASIC9.39□□□□□ -0.91
P04224 Phf21a-203ENSMUST00000090586 6310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC9.38□□□□□ -0.91
P04224 Pde2a-212ENSMUST00000211368 3885 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
P04224 Cd300a-201ENSMUST00000045151 4633 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 Nkiras1-202ENSMUST00000132374 4598 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 Cdkn1b-202ENSMUST00000067327 4552 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 Mid1-202ENSMUST00000078947 3591 ntTSL 5 BASIC9.38□□□□□ -0.91
P04224 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
P04224 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC9.38□□□□□ -0.91
P04224 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 Platr9-202ENSMUST00000149572 1556 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
P04224 Nudt13-207ENSMUST00000224311 1574 ntBASIC9.38□□□□□ -0.91
P04224 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 Sgk2-202ENSMUST00000117123 3034 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 Anapc1-203ENSMUST00000110333 4214 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC9.38□□□□□ -0.91
P04224 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC9.38□□□□□ -0.91
P04224 Tardbp-202ENSMUST00000084125 7477 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 Bcl2l11-201ENSMUST00000019281 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
P04224 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 Gm44445-201ENSMUST00000204075 2683 ntBASIC9.38□□□□□ -0.91
P04224 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 Gm14724-201ENSMUST00000118400 537 ntBASIC9.38□□□□□ -0.91
P04224 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC9.38□□□□□ -0.91
P04224 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
P04224 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC9.38□□□□□ -0.91
P04224 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 Gm25881-201ENSMUST00000157783 103 ntBASIC9.38□□□□□ -0.91
P04224 Gm18734-201ENSMUST00000172937 808 ntBASIC9.38□□□□□ -0.91
P04224 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC9.38□□□□□ -0.91
P04224 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC9.38□□□□□ -0.91
P04224 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
P04224 Gm5869-201ENSMUST00000200248 1257 ntBASIC9.38□□□□□ -0.91
P04224 AC122891.1-201ENSMUST00000218671 268 ntBASIC9.38□□□□□ -0.91
P04224 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC9.38□□□□□ -0.91
P04224 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
P04224 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
P04224 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 Radil-202ENSMUST00000085758 3714 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
P04224 Ptrh2-202ENSMUST00000108022 3038 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
P04224 Zscan21-202ENSMUST00000080732 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 98.5 ms