Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.39□□□□□ -0.59
Itgb3O54890 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Itgb3O54890 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.39□□□□□ -0.59
Itgb3O54890 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Itgb3O54890 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Itgb3O54890 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Itgb3O54890 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Itgb3O54890 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Itgb3O54890 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Itgb3O54890 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Itgb3O54890 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Itgb3O54890 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Itgb3O54890 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Itgb3O54890 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Itgb3O54890 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Itgb3O54890 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Itgb3O54890 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Itgb3O54890 AC154528.2-201ENSMUST00000228432 3023 ntBASIC11.38□□□□□ -0.59
Itgb3O54890 Gm12712-201ENSMUST00000120676 801 ntBASIC11.38□□□□□ -0.59
Itgb3O54890 Gm25288-201ENSMUST00000122800 265 ntBASIC11.38□□□□□ -0.59
Itgb3O54890 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC11.38□□□□□ -0.59
Itgb3O54890 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Itgb3O54890 Gm25951-201ENSMUST00000175330 64 ntBASIC11.38□□□□□ -0.59
Itgb3O54890 Gm18801-201ENSMUST00000186616 536 ntBASIC11.38□□□□□ -0.59
Itgb3O54890 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Itgb3O54890 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC11.38□□□□□ -0.59
Itgb3O54890 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC11.38□□□□□ -0.59
Itgb3O54890 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC11.38□□□□□ -0.59
Itgb3O54890 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Itgb3O54890 AC154176.1-201ENSMUST00000225897 220 ntBASIC11.38□□□□□ -0.59
Itgb3O54890 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Itgb3O54890 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.38□□□□□ -0.59
Itgb3O54890 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.38□□□□□ -0.59
Itgb3O54890 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Itgb3O54890 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Itgb3O54890 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Itgb3O54890 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Itgb3O54890 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Itgb3O54890 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Itgb3O54890 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Itgb3O54890 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Itgb3O54890 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Itgb3O54890 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Itgb3O54890 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Itgb3O54890 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Itgb3O54890 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Itgb3O54890 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Itgb3O54890 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Itgb3O54890 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Itgb3O54890 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Itgb3O54890 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Itgb3O54890 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Itgb3O54890 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Itgb3O54890 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Itgb3O54890 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Itgb3O54890 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Itgb3O54890 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Itgb3O54890 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Itgb3O54890 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Itgb3O54890 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Itgb3O54890 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Itgb3O54890 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Itgb3O54890 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Itgb3O54890 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC11.37□□□□□ -0.59
Itgb3O54890 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC11.37□□□□□ -0.59
Itgb3O54890 Gm44155-201ENSMUST00000203923 412 ntBASIC11.37□□□□□ -0.59
Itgb3O54890 AC164556.1-201ENSMUST00000221318 751 ntBASIC11.37□□□□□ -0.59
Itgb3O54890 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Itgb3O54890 CT009713.2-201ENSMUST00000225532 1149 ntBASIC11.37□□□□□ -0.59
Itgb3O54890 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Itgb3O54890 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Itgb3O54890 Gm5449-201ENSMUST00000081132 357 ntBASIC11.37□□□□□ -0.59
Itgb3O54890 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Itgb3O54890 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Itgb3O54890 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Itgb3O54890 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Itgb3O54890 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Itgb3O54890 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.37□□□□□ -0.59
Itgb3O54890 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC11.37□□□□□ -0.59
Itgb3O54890 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Itgb3O54890 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Itgb3O54890 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Itgb3O54890 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.36□□□□□ -0.59
Itgb3O54890 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Itgb3O54890 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.36□□□□□ -0.59
Itgb3O54890 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Itgb3O54890 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC11.36□□□□□ -0.59
Itgb3O54890 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Itgb3O54890 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC11.36□□□□□ -0.59
Itgb3O54890 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Itgb3O54890 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Itgb3O54890 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.36□□□□□ -0.59
Itgb3O54890 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Itgb3O54890 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Itgb3O54890 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Itgb3O54890 Gm11957-201ENSMUST00000118304 779 ntBASIC11.36□□□□□ -0.59
Itgb3O54890 Gm11354-201ENSMUST00000121974 422 ntBASIC11.36□□□□□ -0.59
Itgb3O54890 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms