Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
B020004C17RikJ3QP07 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
B020004C17RikJ3QP07 AC149588.2-201ENSMUST00000228182 1859 ntBASIC12.01□□□□□ -0.49
B020004C17RikJ3QP07 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.01□□□□□ -0.49
B020004C17RikJ3QP07 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
B020004C17RikJ3QP07 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
B020004C17RikJ3QP07 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
B020004C17RikJ3QP07 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
B020004C17RikJ3QP07 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
B020004C17RikJ3QP07 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
B020004C17RikJ3QP07 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
B020004C17RikJ3QP07 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
B020004C17RikJ3QP07 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
B020004C17RikJ3QP07 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
B020004C17RikJ3QP07 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
B020004C17RikJ3QP07 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
B020004C17RikJ3QP07 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
B020004C17RikJ3QP07 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Gm12489-201ENSMUST00000119364 148 ntBASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Gm14650-201ENSMUST00000120400 889 ntBASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Gm9513-201ENSMUST00000165591 306 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Gm28746-201ENSMUST00000187453 380 ntBASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Gm8918-201ENSMUST00000190587 1087 ntBASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Gm2474-201ENSMUST00000195162 559 ntBASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Gm3945-201ENSMUST00000196637 683 ntBASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 AC154431.1-201ENSMUST00000224910 880 ntBASIC12□□□□□ -0.49
B020004C17RikJ3QP07 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Gm6727-201ENSMUST00000204102 1518 ntBASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC12□□□□□ -0.49
B020004C17RikJ3QP07 AC130671.3-201ENSMUST00000227393 1897 ntBASIC12□□□□□ -0.49
B020004C17RikJ3QP07 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Gstm6-204ENSMUST00000106684 1179 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Gm23999-201ENSMUST00000158057 104 ntBASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Gm17120-201ENSMUST00000164734 743 ntTSL 3 BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Gm7211-201ENSMUST00000172692 1118 ntBASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Gm38004-201ENSMUST00000192972 357 ntBASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Gm5291-201ENSMUST00000201965 899 ntBASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Gm44155-201ENSMUST00000203923 412 ntBASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Gm45363-201ENSMUST00000210196 1294 ntBASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Gm18124-201ENSMUST00000210695 706 ntBASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 AC100406.1-201ENSMUST00000217305 480 ntBASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Pcbd1-202ENSMUST00000218005 361 ntTSL 3 BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Gm18749-201ENSMUST00000222410 692 ntBASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 AC149294.3-201ENSMUST00000226888 732 ntBASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC11.99□□□□□ -0.49
B020004C17RikJ3QP07 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms