Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Ptma-202ENSMUST00000186255 768 ntTSL 2 BASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Gm43066-201ENSMUST00000199589 1260 ntBASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Gm6426-201ENSMUST00000209048 854 ntBASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Gm45363-201ENSMUST00000210196 1294 ntBASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Myl10-201ENSMUST00000005611 688 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Cnfn-201ENSMUST00000076276 524 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccdc188F6WEU2 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Katna1-202ENSMUST00000165806 1775 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Katna1-201ENSMUST00000019929 1774 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Ighv1-67-201ENSMUST00000103538 294 ntBASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 4930538E20Rik-201ENSMUST00000131383 546 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Gm16104-201ENSMUST00000156260 401 ntTSL 2 BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Ctdp1-203ENSMUST00000161003 1199 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 CT033781.3-201ENSMUST00000221886 504 ntTSL 2 BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Rpl21-ps2-201ENSMUST00000222933 481 ntBASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 AC123692.1-201ENSMUST00000227514 730 ntBASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Rpl6-201ENSMUST00000031617 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Gm6457-201ENSMUST00000066378 815 ntBASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Ap1m2-202ENSMUST00000115433 2586 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Gm7823-201ENSMUST00000120761 1623 ntBASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Tsga10-208ENSMUST00000193669 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccdc188F6WEU2 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Myc-207ENSMUST00000188482 1365 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Gm14111-201ENSMUST00000119851 999 ntBASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Gm14856-201ENSMUST00000121548 613 ntBASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Gm7180-201ENSMUST00000121753 513 ntBASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 1700056N10Rik-201ENSMUST00000141875 1043 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Cfap77-202ENSMUST00000157048 1042 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Plut-201ENSMUST00000172461 855 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms