Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm12774-201ENSMUST00000117881 416 ntBASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Gm13413-201ENSMUST00000120953 602 ntBASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Gm26241-201ENSMUST00000174944 101 ntBASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Gm23976-201ENSMUST00000175001 101 ntBASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Gm22463-201ENSMUST00000175274 101 ntBASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Gm22547-201ENSMUST00000175281 101 ntBASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Gm22913-201ENSMUST00000175297 101 ntBASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Gm23282-201ENSMUST00000175306 101 ntBASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Gm25972-201ENSMUST00000175374 101 ntBASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Gm22414-201ENSMUST00000175466 101 ntBASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Gm26235-201ENSMUST00000175533 101 ntBASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Gm25084-201ENSMUST00000175556 101 ntBASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Gm24973-201ENSMUST00000175588 101 ntBASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Gm23292-201ENSMUST00000175618 101 ntBASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Gm23646-201ENSMUST00000178119 101 ntBASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Gm24643-201ENSMUST00000178305 101 ntBASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Gm24302-201ENSMUST00000178350 101 ntBASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Gm26386-201ENSMUST00000178407 101 ntBASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Gm25458-201ENSMUST00000178981 101 ntBASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Gm22825-201ENSMUST00000179444 101 ntBASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Gm8955-201ENSMUST00000182945 1008 ntBASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Gm38132-201ENSMUST00000193358 707 ntTSL 3 BASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Gm34780-201ENSMUST00000193896 949 ntBASIC10.83□□□□□ -0.68
Col4a6B1AVK5 BC002189-201ENSMUST00000195674 598 ntBASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Gm42952-204ENSMUST00000198572 408 ntTSL 3 BASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Gm20186-203ENSMUST00000202542 741 ntTSL 3 BASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC10.83□□□□□ -0.68
Col4a6B1AVK5 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Pln-205ENSMUST00000219921 531 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Col4a6B1AVK5 AC163646.3-201ENSMUST00000228879 772 ntBASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Olfr1155-201ENSMUST00000099843 945 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Gm5310-201ENSMUST00000197861 1511 ntBASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Ribc1-201ENSMUST00000026288 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Syna-201ENSMUST00000149604 2026 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col4a6B1AVK5 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Gm46339-201ENSMUST00000222720 3539 ntBASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col4a6B1AVK5 3110001I22Rik-201ENSMUST00000035426 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Serpina1b-201ENSMUST00000095450 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Rab38-201ENSMUST00000107256 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Gm37516-201ENSMUST00000192593 1954 ntBASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Spaca3-201ENSMUST00000103222 831 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Gm23908-201ENSMUST00000104599 132 ntBASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Gm436-201ENSMUST00000105747 1224 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Vegfa-204ENSMUST00000113520 654 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Igsf5-204ENSMUST00000113795 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Gm12240-201ENSMUST00000120178 229 ntBASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Hsd17b13-203ENSMUST00000120320 1118 ntTSL 5 BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Gm16131-201ENSMUST00000131007 659 ntTSL 3 BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Gm15351-202ENSMUST00000150686 271 ntTSL 3 BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Gm20821-202ENSMUST00000180352 684 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 4933436E23Rik-201ENSMUST00000192824 1111 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Pf4-203ENSMUST00000202625 411 ntTSL 2 BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Snrp1c-ps1-201ENSMUST00000205464 474 ntBASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Gm5951-201ENSMUST00000220283 504 ntBASIC10.82□□□□□ -0.68
Col4a6B1AVK5 AC154766.1-201ENSMUST00000226550 936 ntBASIC10.82□□□□□ -0.68
Col4a6B1AVK5 AC116390.1-201ENSMUST00000227975 670 ntBASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Cks2-201ENSMUST00000075853 692 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Cbx3-ps2-201ENSMUST00000099421 544 ntBASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 AC132833.1-202ENSMUST00000228875 1690 ntBASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Gm43362-201ENSMUST00000198192 2470 ntBASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Tmbim7-201ENSMUST00000014673 1552 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Gm15535-202ENSMUST00000148478 1519 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 AU015228-201ENSMUST00000121103 1320 ntBASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Fam13c-203ENSMUST00000173042 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Plbd1-201ENSMUST00000032336 2010 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Wfdc16-201ENSMUST00000109336 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Rhox10-201ENSMUST00000115150 763 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Gm6881-201ENSMUST00000121811 833 ntBASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Gm11629-201ENSMUST00000123784 384 ntTSL 3 BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Gm15208-201ENSMUST00000134448 493 ntTSL 3 BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Gm3752-202ENSMUST00000167833 450 ntTSL 5 BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Gm10128-201ENSMUST00000171360 615 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms